| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is mjaIIIM [H]
Identifier: 189184147
GI number: 189184147
Start: 1273837
End: 1274466
Strand: Reverse
Name: mjaIIIM [H]
Synonym: OTT_1240
Alternate gene names: 189184147
Gene position: 1274466-1273837 (Counterclockwise)
Preceding gene: 189184149
Following gene: 189184144
Centisome position: 63.44
GC content: 29.68
Gene sequence:
>630_bases TTGTCTGATATTAATCTCGACTTAATTACTAGTTATCACGCTGTAAAAAAGAATCCAAATGAGGTAAATAGATTACTAAA TCTATATCACAAAAACCATTCTGAAAACTACTACTATAAAATAAGAGACAATTATTATAGTAATGATCCTAATGATATCA CTGCAAAATTTATATATCTTAATAAATATTCCTTTAGGGGAATTTATAGGCTAAACAGAGATGGGACATCTGCTCAAACA TTTTCTGATAAGCGATATCTTAAGCTTCATATTTGCTCTAGAATAAATAAATGTAGTAACCTTCTTGCTGGTGTATCAAT TTACGCTACAGATTTTTCATTTATAGAGCCTCAGCAAAATGACTTTGTTTATTTTGATCCTCCTTACCATAAATCTGGAG AAAGGTTCTACACTAGACTTCCATTTGATGAAAAAGATCAAATTAGATTACGGGATTTTGTCCAAGAATTAACAAATAAA GGTGTTAAAATTATGCTTTCAAATAATAACACTACCTTCATTAGAGACTTATATAAAGACTTCTTCATCACTCATATTGG AGTTACATACTCAATCAATGAACAACGCAATCCTGTTAATGAGCTAATCATTACTAACTATTCGACCTGA
Upstream 100 bases:
>100_bases AGAGCATCTTCCTTCAGGGCCATACTATAATTACTATGAACCATTCCTTGGAGGTGGGGCTTTATTTTTTCAAGTTAGGC ATCTGTTTAAACAATGTTTT
Downstream 100 bases:
>100_bases GCTTAGCAATTAAATGTGAACCCGCCATCCAAATCGTATATGAATAGGAAGTGGTCTATAGTTAGCAATTGTGCTACATT CAATGTCTAAATATGTATCT
Product: N6 adenine-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.MjaIII; Adenine-specific methyltransferase MjaIII [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQT FSDKRYLKLHICSRINKCSNLLAGVSIYATDFSFIEPQQNDFVYFDPPYHKSGERFYTRLPFDEKDQIRLRDFVQELTNK GVKIMLSNNNTTFIRDLYKDFFITHIGVTYSINEQRNPVNELIITNYST
Sequences:
>Translated_209_residues MSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQT FSDKRYLKLHICSRINKCSNLLAGVSIYATDFSFIEPQQNDFVYFDPPYHKSGERFYTRLPFDEKDQIRLRDFVQELTNK GVKIMLSNNNTTFIRDLYKDFFITHIGVTYSINEQRNPVNELIITNYST >Mature_208_residues SDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTF SDKRYLKLHICSRINKCSNLLAGVSIYATDFSFIEPQQNDFVYFDPPYHKSGERFYTRLPFDEKDQIRLRDFVQELTNKG VKIMLSNNNTTFIRDLYKDFFITHIGVTYSINEQRNPVNELIITNYST
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MjaIII endonuclease (Potential) [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 24889; Mature: 24758
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYL CCCCCEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEE NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSRINKCSNLLAGVSIYATDFSFIEPQQN ECCCCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCEEEEEECCEEECCCCC DFVYFDPPYHKSGERFYTRLPFDEKDQIRLRDFVQELTNKGVKIMLSNNNTTFIRDLYKD CEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH FFITHIGVTYSINEQRNPVNELIITNYST HHHHHEEEEEEECCCCCCCHHEEEEECCC >Mature Secondary Structure SDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYL CCCCEEEEEHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEE NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSRINKCSNLLAGVSIYATDFSFIEPQQN ECCCCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCEEEEEECCEEECCCCC DFVYFDPPYHKSGERFYTRLPFDEKDQIRLRDFVQELTNKGVKIMLSNNNTTFIRDLYKD CEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH FFITHIGVTYSINEQRNPVNELIITNYST HHHHHEEEEEEECCCCCCCHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]