Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184017

Identifier: 189184017

GI number: 189184017

Start: 1143206

End: 1143586

Strand: Reverse

Name: 189184017

Synonym: OTT_1110

Alternate gene names: NA

Gene position: 1143586-1143206 (Counterclockwise)

Preceding gene: 189184018

Following gene: 189184015

Centisome position: 56.92

GC content: 25.98

Gene sequence:

>381_bases
ATGTATTTATACGAGGTTTATTACAATCCAAATGCAAAAGTGCATCAGGTAATATTATCAAGGCATGGCTTTTCTATTAA
AGCAGCTATATTTAGTTTTCTATGGGCTGGATATCATGGTATGTGGTATATATTAATATCAGGAATACTAATCAATTCTA
TTATAATATTTGGAATAGATAATCCAATTATGTTAACTTTAGGTCAAATAACACTAATTACAATATCTATATTTTTTGGT
ATTTTTGCTAGTGATATTCTAACATTCCATTTAAATATCAAAGGTTATCAACTTTATGACATTGTATATGCTAACTCAAC
AATTGATGGAGAATATAAGTTTTACAAAAAGCTTTTGAGAAAATATACAAAGCAAAATTAG

Upstream 100 bases:

>100_bases
TCATATTGAGTAATATGCGCTATTAATTATTACATTAAATAATATTTAGTGTAAAAATTGCAAAGTATTATTAAGAGTTT
ATATAAATTTAAGCAGTATC

Downstream 100 bases:

>100_bases
TAGCCACACTTGCTATTATATAAATTATACTTAAACTTAAGCTTTATATAAAATATGGTGTACTCTTAATGCAAAGCAAG
ATACAAGGTATACCAACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGIDNPIMLTLGQITLITISIFFG
IFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLRKYTKQN

Sequences:

>Translated_126_residues
MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGIDNPIMLTLGQITLITISIFFG
IFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLRKYTKQN
>Mature_126_residues
MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGIDNPIMLTLGQITLITISIFFG
IFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLRKYTKQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14664; Mature: 14664

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGID
CEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
NPIMLTLGQITLITISIFFGIFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLR
CCEEEEECHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHH
KYTKQN
HHHCCC
>Mature Secondary Structure
MYLYEVYYNPNAKVHQVILSRHGFSIKAAIFSFLWAGYHGMWYILISGILINSIIIFGID
CEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
NPIMLTLGQITLITISIFFGIFASDILTFHLNIKGYQLYDIVYANSTIDGEYKFYKKLLR
CCEEEEECHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHH
KYTKQN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]