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The map label for this gene is secY [H]

Identifier: 189183971

GI number: 189183971

Start: 1093188

End: 1094495

Strand: Direct

Name: secY [H]

Synonym: OTT_1064

Alternate gene names: 189183971

Gene position: 1093188-1094495 (Clockwise)

Preceding gene: 189183970

Following gene: 189183972

Centisome position: 54.41

GC content: 30.2

Gene sequence:

>1308_bases
ATGCAGAATTCTTCTTTTTATGATCAGCATGCAACTCTTATTTCTAAGGTATTATTTACGCTGATGATGTTAATGATATG
TAGAATAGGCGTATATATACCTATAGCTGGTATAGACTCAAATAGTTTAAATGAATTATTACCTCAGAACCAAATTGGTA
TTTTAGGAATGTTTAACATCCTTTCTGGAGGTGCTTTTGTTAATATGTCCATATTTGCTTTAGCAATAATGCCATATATT
ACTGCTTCGATTATAATACAACTATTATCTATGGCTTATCCAGCTTTAGATAAATTAAAAAAAGAAGGTGAAAGAGGGCG
GCAACAAATAACTCAGCTTACACGATATTGTACTATTGCATTGGCTTCGTTTCAAGCTTTCGGTATTGCAATATGGTTAG
AACATTTTACTACTGAATCTGGAGCAGTTGTAATAATGCCAGGAATATATTTTCGACTAACTACTGTTGTAACTTTAGTT
GTAGGTACAATTTTTTTAATGTGGATTGGTGAACAGATTTCTTCTCGTGGAATTGGTAATGGGTCTTCATTAATTATATT
TATAGGGATAGTGTCTGGTATACCAAAATCTATTATTACTACTTTTGAGTTATCTAGAAGAGGAGGTGATTCTCCTTTTA
TATCTGTGATTTTTTTAGTGGTTATAGTTATTTTAATAGCATTTATAGTATTCTTTGAGAAAGCGCAAAGAAGAATTTTA
GTTCATTATCCTAGACGGCAGTTAGGTAATAAGATTTATGGTGGTGATACTACGCATATACCTCTAAAATTGAATATTCC
AGGAGTTATTCCGCCTATTTTTGCTAGTTCTTTGCTATTATTTCCTCTTACTGTGTTAAATCTATCTCAAAATAAAGATT
CAGCAATTTTACAAGCAATTGTTAGTTATTTTAGTCCAGGTAAGTTGGTTTTTATATTATGCTATGGGTTGTTAATTATA
TTTTTTAGTATTTTTTATACAGCTATAGTATTTAATTCAGAGGAAACAGCTGAAAATTTAAGAAAATATAATGCTTATAT
TCAAGGTAGAAGACCAGGAAAGAGTACTGCTGAGTATTTTGATTATTTACTTAGTAGAATAAGTATATTAGGAGCGCTAT
ACTTGTGTATTGTATGTCTTGTGCCTGAGGTTTTAGGGAATATAATGCCTAGTTTATTTACTTCTAGTGGCACAAGTTTA
CTTATTGTAGTAAATGTAGTGCTTGATACTTTGTCACAAATTCAAACTTATATTTTTACTAGTAGATATGATTCATTGGT
TAAGAAAATGAAATACAAAGATAAGTGA

Upstream 100 bases:

>100_bases
CTTTTAACTAAGCTTGATCTGCAGTTTAATTTGGATGAGTATTCTATATCTGCACGAAAAAATATCATAAAGTTAGGAAT
GAAAGTAATTAATAATTAGT

Downstream 100 bases:

>100_bases
GGATAAGTTTGATATTAGTTTTTATAGGACCGCCTGGCTCTGGTAAAGGTACACAAGCTTCTTTATTGTCAGAAAAGTTT
AGTATTATTTCTGTAGGAAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MQNSSFYDQHATLISKVLFTLMMLMICRIGVYIPIAGIDSNSLNELLPQNQIGILGMFNILSGGAFVNMSIFALAIMPYI
TASIIIQLLSMAYPALDKLKKEGERGRQQITQLTRYCTIALASFQAFGIAIWLEHFTTESGAVVIMPGIYFRLTTVVTLV
VGTIFLMWIGEQISSRGIGNGSSLIIFIGIVSGIPKSIITTFELSRRGGDSPFISVIFLVVIVILIAFIVFFEKAQRRIL
VHYPRRQLGNKIYGGDTTHIPLKLNIPGVIPPIFASSLLLFPLTVLNLSQNKDSAILQAIVSYFSPGKLVFILCYGLLII
FFSIFYTAIVFNSEETAENLRKYNAYIQGRRPGKSTAEYFDYLLSRISILGALYLCIVCLVPEVLGNIMPSLFTSSGTSL
LIVVNVVLDTLSQIQTYIFTSRYDSLVKKMKYKDK

Sequences:

>Translated_435_residues
MQNSSFYDQHATLISKVLFTLMMLMICRIGVYIPIAGIDSNSLNELLPQNQIGILGMFNILSGGAFVNMSIFALAIMPYI
TASIIIQLLSMAYPALDKLKKEGERGRQQITQLTRYCTIALASFQAFGIAIWLEHFTTESGAVVIMPGIYFRLTTVVTLV
VGTIFLMWIGEQISSRGIGNGSSLIIFIGIVSGIPKSIITTFELSRRGGDSPFISVIFLVVIVILIAFIVFFEKAQRRIL
VHYPRRQLGNKIYGGDTTHIPLKLNIPGVIPPIFASSLLLFPLTVLNLSQNKDSAILQAIVSYFSPGKLVFILCYGLLII
FFSIFYTAIVFNSEETAENLRKYNAYIQGRRPGKSTAEYFDYLLSRISILGALYLCIVCLVPEVLGNIMPSLFTSSGTSL
LIVVNVVLDTLSQIQTYIFTSRYDSLVKKMKYKDK
>Mature_435_residues
MQNSSFYDQHATLISKVLFTLMMLMICRIGVYIPIAGIDSNSLNELLPQNQIGILGMFNILSGGAFVNMSIFALAIMPYI
TASIIIQLLSMAYPALDKLKKEGERGRQQITQLTRYCTIALASFQAFGIAIWLEHFTTESGAVVIMPGIYFRLTTVVTLV
VGTIFLMWIGEQISSRGIGNGSSLIIFIGIVSGIPKSIITTFELSRRGGDSPFISVIFLVVIVILIAFIVFFEKAQRRIL
VHYPRRQLGNKIYGGDTTHIPLKLNIPGVIPPIFASSLLLFPLTVLNLSQNKDSAILQAIVSYFSPGKLVFILCYGLLII
FFSIFYTAIVFNSEETAENLRKYNAYIQGRRPGKSTAEYFDYLLSRISILGALYLCIVCLVPEVLGNIMPSLFTSSGTSL
LIVVNVVLDTLSQIQTYIFTSRYDSLVKKMKYKDK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=422, Percent_Identity=48.3412322274881, Blast_Score=367, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48358; Mature: 48358

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNSSFYDQHATLISKVLFTLMMLMICRIGVYIPIAGIDSNSLNELLPQNQIGILGMFNI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHH
LSGGAFVNMSIFALAIMPYITASIIIQLLSMAYPALDKLKKEGERGRQQITQLTRYCTIA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASFQAFGIAIWLEHFTTESGAVVIMPGIYFRLTTVVTLVVGTIFLMWIGEQISSRGIGN
HHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSSLIIFIGIVSGIPKSIITTFELSRRGGDSPFISVIFLVVIVILIAFIVFFEKAQRRIL
CCCEEEEEEHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VHYPRRQLGNKIYGGDTTHIPLKLNIPGVIPPIFASSLLLFPLTVLNLSQNKDSAILQAI
EECCHHHHCCEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSYFSPGKLVFILCYGLLIIFFSIFYTAIVFNSEETAENLRKYNAYIQGRRPGKSTAEYF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
DYLLSRISILGALYLCIVCLVPEVLGNIMPSLFTSSGTSLLIVVNVVLDTLSQIQTYIFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRYDSLVKKMKYKDK
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MQNSSFYDQHATLISKVLFTLMMLMICRIGVYIPIAGIDSNSLNELLPQNQIGILGMFNI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHH
LSGGAFVNMSIFALAIMPYITASIIIQLLSMAYPALDKLKKEGERGRQQITQLTRYCTIA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASFQAFGIAIWLEHFTTESGAVVIMPGIYFRLTTVVTLVVGTIFLMWIGEQISSRGIGN
HHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSSLIIFIGIVSGIPKSIITTFELSRRGGDSPFISVIFLVVIVILIAFIVFFEKAQRRIL
CCCEEEEEEHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
VHYPRRQLGNKIYGGDTTHIPLKLNIPGVIPPIFASSLLLFPLTVLNLSQNKDSAILQAI
EECCHHHHCCEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSYFSPGKLVFILCYGLLIIFFSIFYTAIVFNSEETAENLRKYNAYIQGRRPGKSTAEYF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH
DYLLSRISILGALYLCIVCLVPEVLGNIMPSLFTSSGTSLLIVVNVVLDTLSQIQTYIFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRYDSLVKKMKYKDK
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA