| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is rpmC
Identifier: 189183959
GI number: 189183959
Start: 1088392
End: 1088613
Strand: Direct
Name: rpmC
Synonym: OTT_1052
Alternate gene names: NA
Gene position: 1088392-1088613 (Clockwise)
Preceding gene: 189183958
Following gene: 189183960
Centisome position: 54.18
GC content: 20.27
Gene sequence:
>222_bases ATGAATGAGTTTAAAAAATATAGCGATTTATGTAATATTGAATTGCAAGGTTTACGTGATTTATTATTAAGATATAAAAA AAAATTATTTAATGATAGATTTCAAAATAGTGTTGATGTAGTTAATTCTGTTAAAAATTTTGGTTGTTTAAAGAAAAAAA TAGCTCAAATTAGCACAGAAATTTTGCAAAGAACAATAAAAAAAAATGAGGAAGAAAAATAA
Upstream 100 bases:
>100_bases ATATTGTTTGAGCTTGATGGAGTAAGTGAAGGTATAGCAATTAAAGCGTTAGAATTGGCTGGTGCTAAATTGCCAGTGCG AACTAAAATAGTAAAGCGTT
Downstream 100 bases:
>100_bases ATGCCAAGAAGAGTTTTACAGGGGCAGGTAATAAGTGCTAAATCAGATAAGACCATAATTGTGAGTGTTGAACGTAGATT TAAGCATCCTGTGTATCATA
Product: 50S ribosomal protein L29
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTEILQRTIKKNEEEK
Sequences:
>Translated_73_residues MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTEILQRTIKKNEEEK >Mature_73_residues MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTEILQRTIKKNEEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8696; Mature: 8696
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTE CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILQRTIKKNEEEK HHHHHHHHCCCCC >Mature Secondary Structure MNEFKKYSDLCNIELQGLRDLLLRYKKKLFNDRFQNSVDVVNSVKNFGCLKKKIAQISTE CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILQRTIKKNEEEK HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA