| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183943
Identifier: 189183943
GI number: 189183943
Start: 1076744
End: 1076899
Strand: Direct
Name: 189183943
Synonym: OTT_1036
Alternate gene names: NA
Gene position: 1076744-1076899 (Clockwise)
Preceding gene: 189183937
Following gene: 189183949
Centisome position: 53.6
GC content: 31.41
Gene sequence:
>156_bases ATGTCAGTTAAAATTACTAAAGGCAATAAAAGCGACCTATCTATAGCTTCAGTTATTTCTGAAGGCCTATCTGGTAAATT GTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTTTCATCAACTGTTCTCCAATGGTCTACGTTTATTTACTAA
Upstream 100 bases:
>100_bases TTTATGCCAAACCTATTTAAATCTTCATACTGATACTATCTGCCTTAGAAGACCAATTTTACCTATAGAACATCTTATAA TCAATAACAAAGGCGAAATA
Downstream 100 bases:
>100_bases TCTTCGTAAAGATATGAAAACATATTTATTAGACATAGATGATAAGTGCTTATTAAATAAACGTTCTTTAATTGAATCTG TCTTTAATGTACTAAAAAAA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MSVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKELFSSTVLQWSTFIY
Sequences:
>Translated_51_residues MSVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKELFSSTVLQWSTFIY >Mature_50_residues SVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKELFSSTVLQWSTFIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5576; Mature: 5445
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKELFSSTVLQWSTFIY CCEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVKITKGNKSDLSIASVISEGLSGKLFGDKAYISKELFSSTVLQWSTFIY CEEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA