| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183942
Identifier: 189183942
GI number: 189183942
Start: 1075388
End: 1076536
Strand: Reverse
Name: 189183942
Synonym: OTT_1035
Alternate gene names: NA
Gene position: 1076536-1075388 (Counterclockwise)
Preceding gene: 189183944
Following gene: 189183941
Centisome position: 53.59
GC content: 29.85
Gene sequence:
>1149_bases ATGCGACCTGTAGTATTCGATATTTTAACCAATGGTTGTAATTTTGTTAAAAATAATAGTAACAATAATGACACAATATT TTATAACTTTATTGGAAATATCATTCCGCCAGAATGGAGAAAGCTAACTGGAGATAATGGAAAAGCATTAAGCAAGACAT CTAAACAGCTTTTATCATTCATAGTATTTAGACTACATATCTATTACAACAAAGATATAGATGAATTACAGGAAAGTTAT CAGCTTTATGAAGATAAGCTTAATGTTGGTCAAAGAAGAGTTAGGCAATGCTTAGTAGAATTAAGAGATGCAGGTTTTAT TGAAATTGAAAATAGGACAATAATTAAAGACAATCTTAAGTTACGTAATGTCCCTTGCATAAAAATTCTGAAAAATTTTC AGCACTATAGTGAAAAAGGAAAAGAAGAAAATATAGCCTTACCAGAAAAAAAATTTCGTCCCAACCTGAAAGAAATTTCA GGTCAACCTGAAACTTTTTTCAGGGACATATATAGATATATAAAAAAATCTAAAATATCTAGATCTACTGAAGGTGAGTT AGTAGAGAATAAAAAAAATGAAAATGAAGAACAAAATTTTCAAAATGTTGATGATTTTGAAAATGATATACAGATTTCAA CTAAAAATTGCAATCAAGACATTGAATCACTAATAACAAAGATTCTCAAGTCTTCGAATTGTAAAAAAGAATGGTTCAAA AGGTACAGGCTAGAAGAGTTTTACCAACTAACACCAGAAGATGCAGTTGCACTGCAACACAAGTCTGATAGAGCTTTTAA CATATACTTTATCAACAAATTACTATTAAAGCTAGCAGATCAATATTCGAATTATCATTTTGGCTGCAAGGCATCAGTTC TAAACTATATGGCAAAAGCGTTAGCGAATGAATTACGAACTACTGATCAGGCAAATAGAGACAACTGTAAATTTGATAAC GAATTTAATAAGGAAAAATATCTTACTCAAATTGAAACAAGCGCAAATCTTAGTAAGGAAAGTCAGTTGAAACATAAAAT TGCTGGTTCTTTTGAAGCAGCTATGGCTTATCAAATTTTGACTTCTTGTAGTTTTGGGCCAGCAGTTCGAACTAGTTTTT TTTTAAGTTGCTTAAAAATATCACACTAA
Upstream 100 bases:
>100_bases TTCAACCTATTTTCAACCTTTTGAACAAAAATTTGATGGTAATTTGTAAAAAAATTATTTTCTAAAACACCTACTATAGC TGTATTTTTGGAGATGAAAA
Downstream 100 bases:
>100_bases CAGAATGTGACGAATCAAAGATATTACAAGCTGTACAAGATGTATATGGATACGAAATTCAAGAATTGCAAGTTACACCA TTTGAGCAACTCAAAACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRPVVFDILTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY QLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLKLRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEIS GQPETFFRDIYRYIKKSKISRSTEGELVENKKNENEEQNFQNVDDFENDIQISTKNCNQDIESLITKILKSSNCKKEWFK RYRLEEFYQLTPEDAVALQHKSDRAFNIYFINKLLLKLADQYSNYHFGCKASVLNYMAKALANELRTTDQANRDNCKFDN EFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMAYQILTSCSFGPAVRTSFFLSCLKISH
Sequences:
>Translated_382_residues MRPVVFDILTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY QLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLKLRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEIS GQPETFFRDIYRYIKKSKISRSTEGELVENKKNENEEQNFQNVDDFENDIQISTKNCNQDIESLITKILKSSNCKKEWFK RYRLEEFYQLTPEDAVALQHKSDRAFNIYFINKLLLKLADQYSNYHFGCKASVLNYMAKALANELRTTDQANRDNCKFDN EFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMAYQILTSCSFGPAVRTSFFLSCLKISH >Mature_382_residues MRPVVFDILTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY QLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLKLRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEIS GQPETFFRDIYRYIKKSKISRSTEGELVENKKNENEEQNFQNVDDFENDIQISTKNCNQDIESLITKILKSSNCKKEWFK RYRLEEFYQLTPEDAVALQHKSDRAFNIYFINKLLLKLADQYSNYHFGCKASVLNYMAKALANELRTTDQANRDNCKFDN EFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMAYQILTSCSFGPAVRTSFFLSCLKISH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44726; Mature: 44726
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVVFDILTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSF CCCEEHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHH IVFRLHIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCE LRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEISGQPETFFRDIYRYIKKSKIS ECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCC RSTEGELVENKKNENEEQNFQNVDDFENDIQISTKNCNQDIESLITKILKSSNCKKEWFK CCCCCHHHHCCCCCCHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHH RYRLEEFYQLTPEDAVALQHKSDRAFNIYFINKLLLKLADQYSNYHFGCKASVLNYMAKA HHHHHHHHHCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LANELRTTDQANRDNCKFDNEFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMAYQIL HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH TSCSFGPAVRTSFFLSCLKISH HHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRPVVFDILTNGCNFVKNNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSF CCCEEHHHHHCCCCEEECCCCCCCEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHHH IVFRLHIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFIEIENRTIIKDNLK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCE LRNVPCIKILKNFQHYSEKGKEENIALPEKKFRPNLKEISGQPETFFRDIYRYIKKSKIS ECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCC RSTEGELVENKKNENEEQNFQNVDDFENDIQISTKNCNQDIESLITKILKSSNCKKEWFK CCCCCHHHHCCCCCCHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHH RYRLEEFYQLTPEDAVALQHKSDRAFNIYFINKLLLKLADQYSNYHFGCKASVLNYMAKA HHHHHHHHHCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LANELRTTDQANRDNCKFDNEFNKEKYLTQIETSANLSKESQLKHKIAGSFEAAMAYQIL HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH TSCSFGPAVRTSFFLSCLKISH HHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA