| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is ubiG [H]
Identifier: 189183833
GI number: 189183833
Start: 966559
End: 967299
Strand: Direct
Name: ubiG [H]
Synonym: OTT_0926
Alternate gene names: 189183833
Gene position: 966559-967299 (Clockwise)
Preceding gene: 189183831
Following gene: 189183836
Centisome position: 48.11
GC content: 28.61
Gene sequence:
>741_bases ATGTATAATAACTCAACAATAGATCAAGAGGAAATAGAAAAATTCAATACTATAGCCAATGAATGGTGGAATCCTAATGG CAAGTTTAAGCAATTACATTTAATGAATCCAGCCAGAATCAGATTTATTAAGCAAAAAATACTATTACATTATAATTTAA TTGATAGTATAACAAGGCCTTTTCATGGGCTAAAAATTGCTGATATCGGTTGCGGAGGTGGAATAACATCAATACCAATG GCTAAGCTAGGCGCTACAGTTACAGGTATTGATGCTAGCAGTAAGAATATAGCAGTCGCAAAAATGTATGCTAATAAAAT AGGAGCGCAAGTTAATTACATTCATAGTTCGATTGAAGAGTATGTAAAAATTAGCAATGAAAAATATGACGTAGTTTTAT GCTTAGAAGTGATTGAACATGTAAGTAATATTCAGAGTTTTATTTTATATTTAAGTAAAATTTTAAAGCATGGTGGCATG GCTATCATCTCAACTATTAACAAAACTTTGAAATCTTATGTTTTTGCTATAGGTTTAGCTGAATATTTGTTAGGATATCT ACCAATAGGTACTCATGATTTTAATAAATTTTTGAAACCATCTACTATTAATAATATTTTACTTTCACATAACATGACTT TAAAAGAAATTCAAGGATTATCATATAATCCTATATTGCAACAATGGCGCTTAACTAATGATATAAGCGTTAATTATATC ATGTATATTACTGCAATTTAA
Upstream 100 bases:
>100_bases GTCAGTATATAATATTTACCGTATTTTTTAAATTAATATCACTTTAATATAATTGATTCAACTGCATATTCCATATATCA CTTTTTGAATAAAGCTTCTT
Downstream 100 bases:
>100_bases ATTTTAAGCATCTGCAATAACTATTAAAATCATAATATTTATTCTCAAGTATTAAGCCACTTTTGAAGCAAAGCGCACAT ACCATTTCTGCTTTGTTATA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM AKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEEYVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGM AIISTINKTLKSYVFAIGLAEYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI MYITAI
Sequences:
>Translated_246_residues MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM AKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEEYVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGM AIISTINKTLKSYVFAIGLAEYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI MYITAI >Mature_246_residues MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGLKIADIGCGGGITSIPM AKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEEYVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGM AIISTINKTLKSYVFAIGLAEYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI MYITAI
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=248, Percent_Identity=35.4838709677419, Blast_Score=176, Evalue=1e-44, Organism=Escherichia coli, GI1788564, Length=239, Percent_Identity=38.0753138075314, Blast_Score=192, Evalue=2e-50, Organism=Caenorhabditis elegans, GI115533050, Length=242, Percent_Identity=31.404958677686, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6324476, Length=280, Percent_Identity=27.5, Blast_Score=98, Evalue=1e-21, Organism=Drosophila melanogaster, GI281365311, Length=240, Percent_Identity=32.5, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI24585589, Length=206, Percent_Identity=34.4660194174757, Blast_Score=127, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 27798; Mature: 27798
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRP CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC FHGLKIADIGCGGGITSIPMAKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEE CCCCEEEEECCCCCCCCCCHHHHCCEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHHHH YVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGMAIISTINKTLKSYVFAIGLA HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI HHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCCEEEE MYITAI EEEEEC >Mature Secondary Structure MYNNSTIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRP CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC FHGLKIADIGCGGGITSIPMAKLGATVTGIDASSKNIAVAKMYANKIGAQVNYIHSSIEE CCCCEEEEECCCCCCCCCCHHHHCCEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHHHH YVKISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGMAIISTINKTLKSYVFAIGLA HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EYLLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYI HHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHCCCCCCEEEE MYITAI EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA