| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is nuoA [H]
Identifier: 189183818
GI number: 189183818
Start: 954538
End: 954909
Strand: Direct
Name: nuoA [H]
Synonym: OTT_0911
Alternate gene names: 189183818
Gene position: 954538-954909 (Clockwise)
Preceding gene: 189183814
Following gene: 189183819
Centisome position: 47.51
GC content: 27.96
Gene sequence:
>372_bases ATGCTGCATTTGTTAACTTCATTAGAATATCTTCCTATAGTTATATTTTTTGCTATAGCGCTAGCTTTATCGTTTTTTAT TATAATTTTACCAAAAATATTTGCTAGCAAAAAATACAATAAGAGCAAGCTAGAGAGTTACGAATGTGGATTTGATACTT TTAGTGAAGCTAGAAGTAAGTTTGATATTAGATTTTACCTAATTTCTATGCTATTCATAATTTTTGATTTAGAAATAGCA TTTTTGATACCCTGGGCAGTGAATTTAAAAGAAACAAAAATGTTTGGCTTTTATTCTATGATGTTTTTCCTACTGATATT AGTAATCGGATTTATCTATGAATGGAAAAAAGGTGCGTTAGAATGGGAGTAA
Upstream 100 bases:
>100_bases TTTACACTTGAATCTTAGGTTGTTTTTATAAATGATATTATATAATTTAGTTTAGTTTACAATATTACAGCTTACGGGGC AATACATAAGATTAAATATA
Downstream 100 bases:
>100_bases TTCAGGAGTTAAATGTCAGAAAATACATTTAGTGATACAACAAGTATCTATAATCAAAATTTATCTAATCAAGGATTTAT CTTAGCTAATCTAGAAAATT
Product: NADH dehydrogenase subunit A
Products: NA
Alternate protein names: NADH dehydrogenase I subunit A; NDH-1 subunit A; NUO1 [H]
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLHLLTSLEYLPIVIFFAIALALSFFIIILPKIFASKKYNKSKLESYECGFDTFSEARSKFDIRFYLISMLFIIFDLEIA FLIPWAVNLKETKMFGFYSMMFFLLILVIGFIYEWKKGALEWE
Sequences:
>Translated_123_residues MLHLLTSLEYLPIVIFFAIALALSFFIIILPKIFASKKYNKSKLESYECGFDTFSEARSKFDIRFYLISMLFIIFDLEIA FLIPWAVNLKETKMFGFYSMMFFLLILVIGFIYEWKKGALEWE >Mature_123_residues MLHLLTSLEYLPIVIFFAIALALSFFIIILPKIFASKKYNKSKLESYECGFDTFSEARSKFDIRFYLISMLFIIFDLEIA FLIPWAVNLKETKMFGFYSMMFFLLILVIGFIYEWKKGALEWE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG0838
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 3 (chain A)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788625, Length=109, Percent_Identity=30.2752293577982, Blast_Score=74, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023043 - InterPro: IPR000440 [H]
Pfam domain/function: PF00507 Oxidored_q4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 14604; Mature: 14604
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHLLTSLEYLPIVIFFAIALALSFFIIILPKIFASKKYNKSKLESYECGFDTFSEARSK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHH FDIRFYLISMLFIIFDLEIAFLIPWAVNLKETKMFGFYSMMFFLLILVIGFIYEWKKGAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EWE CCC >Mature Secondary Structure MLHLLTSLEYLPIVIFFAIALALSFFIIILPKIFASKKYNKSKLESYECGFDTFSEARSK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHH FDIRFYLISMLFIIFDLEIAFLIPWAVNLKETKMFGFYSMMFFLLILVIGFIYEWKKGAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EWE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA