Click here to switch to the map view.

The map label for this gene is yfkH [H]

Identifier: 189183815

GI number: 189183815

Start: 951098

End: 951943

Strand: Reverse

Name: yfkH [H]

Synonym: OTT_0908

Alternate gene names: 189183815

Gene position: 951943-951098 (Counterclockwise)

Preceding gene: 189183816

Following gene: 189183813

Centisome position: 47.38

GC content: 29.55

Gene sequence:

>846_bases
ATGATTTGGCGTTATATACGCTGTTTAGCACAAGCTATCTTTAAAACAATAGAGCATGATGGTATTGAGCATGCAGGTTA
TATGGCCTTTATGATATTGTTATCAATTTTTCCATTTGTAATGTTTTTTTTAGCTTCCAGTAGCTTCTTAGGGGTATCGG
AATTAGGAAAAAATGGTATTGCTATATTACTCAGTAATTTACCAGCAAATGTTGCAGAAACTATCGTTCCAAGAATACAT
GAAATACTTGAAAATCCTCCCCAAAGTTTGCTAACTCTAGCAATCTTTGGCACAATCTGGACATCTTCATCATTTGTTGA
AGGCATACGTACAATATTGAATAGAGTACATCAAGTAAATTCTCCCCCGCCTTATTGGTTACGGAGACTATTAAGTATAA
CACAGTTTTTAATAACAAGTATTATCATTTTTTTAACCATAGTACTATTTGTCTTTACTCCAATAATATTAAGAAAGATA
CCAACAACAATTGTCTTTACCAAAACATTAAGTCCAATATGGATTTTATTAAGATATACATTTATTGTGCTAACACTGTT
TTTTACTGTATCAACAATCTACTATTTTGTTCCAAATACTAATTTAAAATTTAGAGAAGTAGTACCAGGAGCAATAATTA
CTGTGATGTTATGGATATTCAGTGGTACAATGCTATCTAAATCTACAGCTTACTATAGTCAATTAAATCTTATATATGGA
TCTTTAGGAAGCATAATTATTACATTATTATTCTTTCATATAATAGCTATAATCTTCATATATGGAGCAGAATTTAATCA
TCAATTACTGAAAAAAAATGGCAAAAAATATTGGCACAAATACTAA

Upstream 100 bases:

>100_bases
TTTTTATTATAGCATTTTTGCAGAAGTTCTGGCGGTTATACATTTTTTCATATATAATCTCATCAAATGTAATTATATTT
AAAAATTTGAAATACATGTT

Downstream 100 bases:

>100_bases
TTGACTATACTTATAATAACCAAAGTTCGATATAAGAAATATAGCAGAGAACAGAATGAGTAAGTACTTCCAATAGTTGG
ACGCAAAAAAATATAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MIWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIAILLSNLPANVAETIVPRIH
EILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNSPPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKI
PTTIVFTKTLSPIWILLRYTFIVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYG
SLGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKKYWHKY

Sequences:

>Translated_281_residues
MIWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIAILLSNLPANVAETIVPRIH
EILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNSPPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKI
PTTIVFTKTLSPIWILLRYTFIVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYG
SLGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKKYWHKY
>Mature_281_residues
MIWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIAILLSNLPANVAETIVPRIH
EILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNSPPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKI
PTTIVFTKTLSPIWILLRYTFIVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYG
SLGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKKYWHKY

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 32244; Mature: 32244

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGI
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
AILLSNLPANVAETIVPRIHEILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVN
EEHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
SPPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKIPTTIVFTKTLSPIWILLRYT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHH
FIVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYG
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
SLGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKKYWHKY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MIWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGI
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
AILLSNLPANVAETIVPRIHEILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVN
EEHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
SPPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKIPTTIVFTKTLSPIWILLRYT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHH
FIVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYG
HHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
SLGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKKYWHKY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]