Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189183808

Identifier: 189183808

GI number: 189183808

Start: 941208

End: 941753

Strand: Reverse

Name: 189183808

Synonym: OTT_0901

Alternate gene names: NA

Gene position: 941753-941208 (Counterclockwise)

Preceding gene: 189183809

Following gene: 189183807

Centisome position: 46.88

GC content: 25.46

Gene sequence:

>546_bases
ATGAATGAAAATTGTTACTACAATATTACTAAGATACATGAGCAACAACTGTTATCTATAGCAGAAATTAAAACTTACCT
ACGTATAAATAGTAGCAACTTTCATAATGAGATGGAAAACACAATCTTGAATACAATAACTATAGCTGCTATTAGCTATG
CAGAAAAATTCCTGCGCATTAATTTAATTGAAAAAAATGTTTGCTATATAATTGTAAAGGTTAAAAGTCTTAAGATTTTG
TTACCAATTGTGCCAGCAAAAAAAATTATTTCTGTTAAAAATCATAGTAATAATTCTATTATTGATCAACAATTTTATCA
GTTAAGTTGCAATAGCACTAATATTCAATTTTCAAGCAATGACTTTATTAATCAGTCCTTTAAAATTGAATACACTGTTT
TAACTACAGATCCTTCAATTATTAATGCGATTAAACCTGGGATATTACTACATATAAGTGAGTTATATGATCGAAGAATT
ATAGAACCTAAAGTATTTGCCAGTATAAACCAAATATATCAAAGCTATAAAAAAGTATTAATATAA

Upstream 100 bases:

>100_bases
TGGAGGCGATATTGTTGTTTCTAAGGCAATAAAAATTTTGCAATTTAGTACTAAAACTAAACAGTAATAAAATAGCGTTA
GGCAAAAAAGTTGAATTATT

Downstream 100 bases:

>100_bases
AATGAGTATCATTAATTTTAGTAGTAGACTAAAGCATAATATCATTTTTTTTGCAAAAGAAAGTAATACTAGTAGATGGA
TTGAAGTTTTATCATGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRINLIEKNVCYIIVKVKSLKIL
LPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSNDFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRI
IEPKVFASINQIYQSYKKVLI

Sequences:

>Translated_181_residues
MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRINLIEKNVCYIIVKVKSLKIL
LPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSNDFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRI
IEPKVFASINQIYQSYKKVLI
>Mature_181_residues
MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRINLIEKNVCYIIVKVKSLKIL
LPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSNDFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRI
IEPKVFASINQIYQSYKKVLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20963; Mature: 20963

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRI
CCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
NLIEKNVCYIIVKVKSLKILLPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSN
EEEECCEEEEEEEEECEEEEEEECCHHHEEEEECCCCCCCHHHHHEEEECCCCEEEECCC
DFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRIIEPKVFASINQIYQSYKKVL
CCCCCEEEEEEEEEECCCHHHHHCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHC
I
C
>Mature Secondary Structure
MNENCYYNITKIHEQQLLSIAEIKTYLRINSSNFHNEMENTILNTITIAAISYAEKFLRI
CCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
NLIEKNVCYIIVKVKSLKILLPIVPAKKIISVKNHSNNSIIDQQFYQLSCNSTNIQFSSN
EEEECCEEEEEEEEECEEEEEEECCHHHEEEEECCCCCCCHHHHHEEEECCCCEEEECCC
DFINQSFKIEYTVLTTDPSIINAIKPGILLHISELYDRRIIEPKVFASINQIYQSYKKVL
CCCCCEEEEEEEEEECCCHHHHHCCCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA