| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183774
Identifier: 189183774
GI number: 189183774
Start: 912962
End: 913177
Strand: Direct
Name: 189183774
Synonym: OTT_0867
Alternate gene names: NA
Gene position: 912962-913177 (Clockwise)
Preceding gene: 189183773
Following gene: 189183775
Centisome position: 45.44
GC content: 38.43
Gene sequence:
>216_bases ATGCGTGATTCAATAATGTCTATGACTGGCACTATCGTGGTTACAAACAATAATGTACACTTTTATGACTCCTTAGCTCA GGACGAAAAAAGTTGGATTAGTCATTTAAAAGGCGGAGAATCAGCCTCGATTTACAGCTGTGATAGTGTCAGTTGCTTGC ATTCAACGCTTGCAACAAAATATCACAATATTACCAGAGCAGTCTTATGCAGGTAA
Upstream 100 bases:
>100_bases CAAGCTCTGCGACAAGCACAAAATAAGGATTCATAGTTAATGCTAGAATGATTATAACATCTTCACTAAAGCAGCAGCAA AGGTTGGAATACCATCAGAT
Downstream 100 bases:
>100_bases AGCTAAACAACAATTGACTAATCTAAAAAATAAGTTTGATCATAATACTGAATTTAGTAACCATGAAATAGCCTTTTTAT CTTCGATTGGAGATATATTT
Product: putative conjugative transfer protein TraH
Products: NA
Alternate protein names: Conjugative Transfer Protein TraH
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITRAVLCR
Sequences:
>Translated_71_residues MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITRAVLCR >Mature_71_residues MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATKYHNITRAVLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7896; Mature: 7896
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATK CCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH YHNITRAVLCR HHHHHHHHHCC >Mature Secondary Structure MRDSIMSMTGTIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDSVSCLHSTLATK CCCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH YHNITRAVLCR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA