Click here to switch to the map view.

The map label for this gene is traH [H]

Identifier: 189183773

GI number: 189183773

Start: 912283

End: 912897

Strand: Direct

Name: traH [H]

Synonym: OTT_0866

Alternate gene names: 189183773

Gene position: 912283-912897 (Clockwise)

Preceding gene: 189183772

Following gene: 189183774

Centisome position: 45.41

GC content: 36.91

Gene sequence:

>615_bases
ATGAGCATCAAAATCAGAGTTTATACCATTACAATGCTATTATTGCTACAAGCTCCAGTATCACTAGCTTGGAATATCGA
AAACGTATTTCAAGGGATGAGTGTTAATGTTACTAGATCTGGATCATATCAAGATCAAGCGGCTGGATATTATGCGGCTG
GCGGATTATCTGCCAGAACAAGCCAAACATCATTTCAGCCATTTGCTATAACTCCACCATCTTTAAACATGAGCTGTAGC
GGTATTGACGCCTATCTTGGTAGCTTCTCTGTTATTTCTGGAGAAGAATTAGTTCAACTAATGAAGAATATTGGTTCTCA
AGCTAAAGTTTATGCATTTTCATTAGGATTAAAAACATTTGCTCCACAGATTGAGAACGCTCTCAAGGACTTACGTAATC
TAGCAATGGAGATGAATCAATTTGCCAAAGGAGATTGTGAATTAACAAAAGCATTATTTGCTACAGCTTTACCAAGAAAC
TGGGCTATGAGAGAAGCTGTTTGCCGTGATATACAGTCACAAAGTGGATTTGATTATTTTGCAGCTGGTAAAAAATGTCG
TAATTATTTAGATCAAAAACAAGCTCTGCGACAAGCACAAAATAAGGATTCATAG

Upstream 100 bases:

>100_bases
GTAAGAAAATATATTCAGTAGCTAGAGGCATAATCTCTGAGAATAAAATTATCGACAATATTCTAGCAATCGATAGATAT
TATCATAAATTGGAGACTAG

Downstream 100 bases:

>100_bases
TTAATGCTAGAATGATTATAACATCTTCACTAAAGCAGCAGCAAAGGTTGGAATACCATCAGATATGCGTGATTCAATAA
TGTCTATGACTGGCACTATC

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSIKIRVYTITMLLLLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITPPSLNMSCS
GIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPRN
WAMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDS

Sequences:

>Translated_204_residues
MSIKIRVYTITMLLLLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITPPSLNMSCS
GIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPRN
WAMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDS
>Mature_203_residues
SIKIRVYTITMLLLLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSARTSQTSFQPFAITPPSLNMSCSG
IDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPRNW
AMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDS

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 22457; Mature: 22326

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKIRVYTITMLLLLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSART
CCEEEEHHHHHHHHHHHCCHHHEECHHHHHCCCEEEEEECCCCCHHHCCEEECCCCCCCC
SQTSFQPFAITPPSLNMSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTF
CCCCCCCEEECCCCCCCCCCHHHHHHCCCCEECHHHHHHHHHHCCCCCEEHHHHHHHHHH
APQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPRNWAMREAVCRDIQSQSGFDYF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH
AAGKKCRNYLDQKQALRQAQNKDS
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIKIRVYTITMLLLLQAPVSLAWNIENVFQGMSVNVTRSGSYQDQAAGYYAAGGLSART
CEEEEHHHHHHHHHHHCCHHHEECHHHHHCCCEEEEEECCCCCHHHCCEEECCCCCCCC
SQTSFQPFAITPPSLNMSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTF
CCCCCCCEEECCCCCCCCCCHHHHHHCCCCEECHHHHHHHHHHCCCCCEEHHHHHHHHHH
APQIENALKDLRNLAMEMNQFAKGDCELTKALFATALPRNWAMREAVCRDIQSQSGFDYF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHH
AAGKKCRNYLDQKQALRQAQNKDS
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]