| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183733
Identifier: 189183733
GI number: 189183733
Start: 867416
End: 867940
Strand: Reverse
Name: 189183733
Synonym: OTT_0826
Alternate gene names: NA
Gene position: 867940-867416 (Counterclockwise)
Preceding gene: 189183735
Following gene: 189183731
Centisome position: 43.2
GC content: 27.62
Gene sequence:
>525_bases ATGTTGTCCCAGATTTTACCAGTATTATTATTTGGCTGCATTCTAGGGCTGAATATAACAAATAAGCTGATAGTATGCTC TTTCTTGTTTATATTATCAGTCTTAATTACTAATCTTATGGCAAAGTTATATCATACAGCTAATGCAATTAGTATTGCAA TGTTATGTGTATTGGGAAGCCTTGCCTTAAATTGGTATAACATCAATATTTTGTTTATAGGTTCATCTGCTGCAATTACC ATATCACTATTTTGCAGTACAAATCTATTTAATATTCTTGATAAGAAATTTGCGTTGTCATTTCCAATTAGCAATTTAAT TAGTTCTGCTATAGTAACCATAATAGATAGTATTATTGTTTCTATTGCTTTATTAAACAAATTTCAAATTAATAAAGTTG TAGAAATATGTCTTAAAGATTGCGTTTTTAAGCTATCGTATGTATCAGTAATAACTATTTGTATATATGCAGTACTATAT TTTATAGAGCATTTAAGAAAAACAAATGTCGCCAGTAAGGCATAA
Upstream 100 bases:
>100_bases TAATACACATGAAAAACTAAATTTGACATTGCTCTGCAAATTTAGTACTTTTTGTAAAGTGGTTTTATAGATTTCATGGA TAATTTTAAGGAGTAGAAAT
Downstream 100 bases:
>100_bases TTTATAATGCCAGCAAAAATATACTGCTGGCATTATATTTATACATCTAAATTATTAACATTTAAAGCATTAGCTTGAAT GAACTCACGTCTAGGCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MLSQILPVLLFGCILGLNITNKLIVCSFLFILSVLITNLMAKLYHTANAISIAMLCVLGSLALNWYNINILFIGSSAAIT ISLFCSTNLFNILDKKFALSFPISNLISSAIVTIIDSIIVSIALLNKFQINKVVEICLKDCVFKLSYVSVITICIYAVLY FIEHLRKTNVASKA
Sequences:
>Translated_174_residues MLSQILPVLLFGCILGLNITNKLIVCSFLFILSVLITNLMAKLYHTANAISIAMLCVLGSLALNWYNINILFIGSSAAIT ISLFCSTNLFNILDKKFALSFPISNLISSAIVTIIDSIIVSIALLNKFQINKVVEICLKDCVFKLSYVSVITICIYAVLY FIEHLRKTNVASKA >Mature_174_residues MLSQILPVLLFGCILGLNITNKLIVCSFLFILSVLITNLMAKLYHTANAISIAMLCVLGSLALNWYNINILFIGSSAAIT ISLFCSTNLFNILDKKFALSFPISNLISSAIVTIIDSIIVSIALLNKFQINKVVEICLKDCVFKLSYVSVITICIYAVLY FIEHLRKTNVASKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19159; Mature: 19159
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSQILPVLLFGCILGLNITNKLIVCSFLFILSVLITNLMAKLYHTANAISIAMLCVLGS CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALNWYNINILFIGSSAAITISLFCSTNLFNILDKKFALSFPISNLISSAIVTIIDSIIV HHHHHEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SIALLNKFQINKVVEICLKDCVFKLSYVSVITICIYAVLYFIEHLRKTNVASKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLSQILPVLLFGCILGLNITNKLIVCSFLFILSVLITNLMAKLYHTANAISIAMLCVLGS CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALNWYNINILFIGSSAAITISLFCSTNLFNILDKKFALSFPISNLISSAIVTIIDSIIV HHHHHEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SIALLNKFQINKVVEICLKDCVFKLSYVSVITICIYAVLYFIEHLRKTNVASKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA