Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is yfgL [C]

Identifier: 189183689

GI number: 189183689

Start: 823677

End: 825029

Strand: Direct

Name: yfgL [C]

Synonym: OTT_0782

Alternate gene names: 189183689

Gene position: 823677-825029 (Clockwise)

Preceding gene: 189183688

Following gene: 189183692

Centisome position: 41.0

GC content: 28.75

Gene sequence:

>1353_bases
ATGAATAAAAAGTTGGCTTTATTGTCTTTACTATCTTTAATATTGTCAAGTTCTACTGTTCAGAATGTTGAATCGTTATC
TAATTCACCAAAGCTGGAAGCAGAAATTGGAGCTAACAAAGTAATGTTACCAATGTTAAAACATGTAAGTAATTGGAATA
ATAATATAGAGCCTATAAATGCTAGCAGTAATAATTTTGCTGTTAAAGAATTTGTTGCGTTTAATAAACTGAAGTTAGCT
GATCATATATCTGCTCCACCTGTCGTTATACAAGATAAGCTCTTTATACTAAATAATTATGCTCAAGTAAGTTGTTACGA
TTTAAATGGTATGAAGAAAGTTTGGACAAAAAAATTAGAACCTCAGCACAGAAACAAAAAAAGATTTGGTGGAGGAAGTA
TATTATTTAATGATGGAAAACTTTATATTAGCTATGGTAGTAGAGATATAGTTATACTTAATGCTAGTAATGGAGATGAA
GTTTTAAGTAAACGGTTACCTGATATAATTAAAGCACCGCCATTAATACATAATAATTTAATGTTAGTTTTAACAGTAAA
TAGACAACTATATTGTATTAATCTAACAAATGCAGAGATTATATGGATGCATCAAGGAGCACAAGAGACACTTATTGGTA
ATAGCTTAATTGCTCCAATAATAAGAGGTAATTTGGTTATTGTAAGTTATTCTTCAGATCAAATTGTAGCTTTAAATTTA
GAAAATGGAAAACTAGTATGGTCAACAAGTTTAGGTAAAAGCAGAGCAGAAGAGAAAAATTCTTGGAAAACATTTTCATT
GTCTAGTTTAGTATCTCAGCCTATTATTAATAATGATATACTATATATAGCAAACGAAGAGGTTATAGAAGCTTACAGAT
TTGGTGCTGTTGATGAAGAAAATCAGAATGGGCAAAAAGCTGTTATGCAGTGGAGTAAAAATATTACTGGTATTAGCAAT
TTTAATTTAATTGGTAATACATTATTTGTTACAACCATTGATGGAAAATTGTTAGCTATGTCATCTGATAATGGTAAAAT
TACCTGGGTAATAAATTTATATGGTAGTAACAAAGATAAATCTAGCACAAAAAATAGTAAGAGTAATAAAAAGCTACTTT
CTAGTATTAAAAACAAGCTTGTAAAATTAGGGTCAAGTAATACACAGTATGCTCTTTCACCTATAGCTATAAATAACAAT
ATAGTAGTAGTTAGTAAGTACCAATGTTTAGTAATTTCTCCAAGTGATGGTCACATACTATCTCGTATACCTATTAATAG
AAATCCTAAATTCTTTGCTGTGTCGGATAAATTATATATTTTTGGCGAAAGTTATGTTAATAGTAGTAGATAG

Upstream 100 bases:

>100_bases
AAGCTAAGATGCTAAAACAAAATTATGAAATTAATATGTAGAATTAAAAGCTACAATTAAACAATAAAAATTAAGTAAAA
TAAAATATAGGTTTGTGTTT

Downstream 100 bases:

>100_bases
AATACGAGCAAATTAGTTTACCAAATGTTATGTATTCTAAGTGGAGATATTTTTTATATTAAATACAGTCTCAATTAAGA
GCATTTATTTAATAAACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPINASSNNFAVKEFVAFNKLKLA
DHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLEPQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDE
VLSKRLPDIIKAPPLIHNNLMLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL
ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEENQNGQKAVMQWSKNITGISN
FNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDKSSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNN
IVVVSKYQCLVISPSDGHILSRIPINRNPKFFAVSDKLYIFGESYVNSSR

Sequences:

>Translated_450_residues
MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPINASSNNFAVKEFVAFNKLKLA
DHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLEPQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDE
VLSKRLPDIIKAPPLIHNNLMLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL
ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEENQNGQKAVMQWSKNITGISN
FNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDKSSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNN
IVVVSKYQCLVISPSDGHILSRIPINRNPKFFAVSDKLYIFGESYVNSSR
>Mature_450_residues
MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPINASSNNFAVKEFVAFNKLKLA
DHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLEPQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDE
VLSKRLPDIIKAPPLIHNNLMLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL
ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEENQNGQKAVMQWSKNITGISN
FNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDKSSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNN
IVVVSKYQCLVISPSDGHILSRIPINRNPKFFAVSDKLYIFGESYVNSSR

Specific function: Unknown

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 49919; Mature: 49919

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPIN
CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCEEC
ASSNNFAVKEFVAFNKLKLADHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLE
CCCCCEEHHHHHHHCCEEEHHCCCCCCEEEECEEEEEECCEEEEEEECCCHHHHHHHCCC
PQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDEVLSKRLPDIIKAPPLIHNNL
CCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCCHHHHHHHCCHHHCCCCEECCCE
MLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL
EEEEEECCEEEEEEECCCEEEEEECCCCHHHCCCHHHHHHHCCCEEEEEECCCCEEEEEE
ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEE
CCCEEEEEECCCCCHHHHCCCCEEEEHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCC
NQNGQKAVMQWSKNITGISNFNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDK
CCCCHHHHHHHHCCCCCCCCCEEECCEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCC
SSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNNIVVVSKYQCLVISPSDGHIL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEEEEEEECCCCCEE
SRIPINRNPKFFAVSDKLYIFGESYVNSSR
EECCCCCCCCEEEEECEEEEEEHHHCCCCC
>Mature Secondary Structure
MNKKLALLSLLSLILSSSTVQNVESLSNSPKLEAEIGANKVMLPMLKHVSNWNNNIEPIN
CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCEEC
ASSNNFAVKEFVAFNKLKLADHISAPPVVIQDKLFILNNYAQVSCYDLNGMKKVWTKKLE
CCCCCEEHHHHHHHCCEEEHHCCCCCCEEEECEEEEEECCEEEEEEECCCHHHHHHHCCC
PQHRNKKRFGGGSILFNDGKLYISYGSRDIVILNASNGDEVLSKRLPDIIKAPPLIHNNL
CCCCCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCCHHHHHHHCCHHHCCCCEECCCE
MLVLTVNRQLYCINLTNAEIIWMHQGAQETLIGNSLIAPIIRGNLVIVSYSSDQIVALNL
EEEEEECCEEEEEEECCCEEEEEECCCCHHHCCCHHHHHHHCCCEEEEEECCCCEEEEEE
ENGKLVWSTSLGKSRAEEKNSWKTFSLSSLVSQPIINNDILYIANEEVIEAYRFGAVDEE
CCCEEEEEECCCCCHHHHCCCCEEEEHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCC
NQNGQKAVMQWSKNITGISNFNLIGNTLFVTTIDGKLLAMSSDNGKITWVINLYGSNKDK
CCCCHHHHHHHHCCCCCCCCCEEECCEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCC
SSTKNSKSNKKLLSSIKNKLVKLGSSNTQYALSPIAINNNIVVVSKYQCLVISPSDGHIL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEEEEEEECCCCCEE
SRIPINRNPKFFAVSDKLYIFGESYVNSSR
EECCCCCCCCEEEEECEEEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]