Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183501

Identifier: 189183501

GI number: 189183501

Start: 608870

End: 609424

Strand: Reverse

Name: 189183501

Synonym: OTT_0594

Alternate gene names: NA

Gene position: 609424-608870 (Counterclockwise)

Preceding gene: 189183502

Following gene: 189183499

Centisome position: 30.33

GC content: 30.45

Gene sequence:

>555_bases
ATGGAAGCAAAACCAGAAATAAGAGAAAAATATCAACAAGTGATAAGTGCTATACCTAAGGAAAACTTGGTATACATAGA
TGAAAGTGGCATTGAAATGTCTATATGCAAGAATAGATGGTGGAGCAAAAAAGGAACTCATGTAAGCAGCAAAAAGAGTG
GTAAATATTACGAGCGTACAAATATTATAGCTGGTTATGTTAATAATAAATCAATCGCACCTATGATATTTAATGGTGCA
TGTAATACAAGATTATTTGAAGCTTGGGTGCAGCAGGTATTAATTAATGAGTTAAAGCCTGCTCAGTTTGTAGTAATGGA
TAATGCTGCTTTTCATAAGTCTAAAAAAACTAAAGAGTTAATAGAATCTGTTGGTTGTAAAGTTATTTTTCTTCCACCTT
ATTCTCTAGATTTAAATCCGATAGAAAAGTTTTGGGCTAATATGAAGTTCTGGATTAGAAATCAAATTACTCAATTTGCT
AAATCTTATGATGCCATTATCTCTTTTTTTCTATGCTCAAACTTCATTGTAAATGACTATAAATATATTGCATAA

Upstream 100 bases:

>100_bases
CTCTGGCACAAACAGGAAAAACATTTTTGAATTTTAATAAGAGTAGTGAGTTATTACATGAAAAAATTCGGCTATAGTTA
TAAAAAAAACGTTTACCTAC

Downstream 100 bases:

>100_bases
TTATAATTGTACATTATCTCTTGTAGACCTTTTTCATTATGCTTTTCATATTTTTTCTTATCATAATCTGGCGTTAAAAG
AGTAAATTTTCCAACAAATC

Product: transposase

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; ISHde5 Transposase OrfA; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MEAKPEIREKYQQVISAIPKENLVYIDESGIEMSICKNRWWSKKGTHVSSKKSGKYYERTNIIAGYVNNKSIAPMIFNGA
CNTRLFEAWVQQVLINELKPAQFVVMDNAAFHKSKKTKELIESVGCKVIFLPPYSLDLNPIEKFWANMKFWIRNQITQFA
KSYDAIISFFLCSNFIVNDYKYIA

Sequences:

>Translated_184_residues
MEAKPEIREKYQQVISAIPKENLVYIDESGIEMSICKNRWWSKKGTHVSSKKSGKYYERTNIIAGYVNNKSIAPMIFNGA
CNTRLFEAWVQQVLINELKPAQFVVMDNAAFHKSKKTKELIESVGCKVIFLPPYSLDLNPIEKFWANMKFWIRNQITQFA
KSYDAIISFFLCSNFIVNDYKYIA
>Mature_184_residues
MEAKPEIREKYQQVISAIPKENLVYIDESGIEMSICKNRWWSKKGTHVSSKKSGKYYERTNIIAGYVNNKSIAPMIFNGA
CNTRLFEAWVQQVLINELKPAQFVVMDNAAFHKSKKTKELIESVGCKVIFLPPYSLDLNPIEKFWANMKFWIRNQITQFA
KSYDAIISFFLCSNFIVNDYKYIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21386; Mature: 21386

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKPEIREKYQQVISAIPKENLVYIDESGIEMSICKNRWWSKKGTHVSSKKSGKYYERT
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCCCEEECC
NIIAGYVNNKSIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVMDNAAFHKSKKTKEL
CEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHH
IESVGCKVIFLPPYSLDLNPIEKFWANMKFWIRNQITQFAKSYDAIISFFLCSNFIVNDY
HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
KYIA
EECC
>Mature Secondary Structure
MEAKPEIREKYQQVISAIPKENLVYIDESGIEMSICKNRWWSKKGTHVSSKKSGKYYERT
CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHCCCCCCCCCCCCCCCCCCEEECC
NIIAGYVNNKSIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVMDNAAFHKSKKTKEL
CEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHH
IESVGCKVIFLPPYSLDLNPIEKFWANMKFWIRNQITQFAKSYDAIISFFLCSNFIVNDY
HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
KYIA
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA