Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183471

Identifier: 189183471

GI number: 189183471

Start: 577961

End: 579676

Strand: Reverse

Name: 189183471

Synonym: OTT_0564

Alternate gene names: NA

Gene position: 579676-577961 (Counterclockwise)

Preceding gene: 189183475

Following gene: 189183470

Centisome position: 28.85

GC content: 31.06

Gene sequence:

>1716_bases
ATGGCGCAAAATTTGCGTAATTTTGCAAGCAATAATTGCAAAATTACTAATAATAACAGTAGCAATAATGCAACTGTCTT
TTATCGTTTTATTGGAAATTTTGTTCCAGCAGAATGGAAAGATCTGATTGGAGATAATGCTAAAGCTTTAAGCAAGACAT
CTAAACAGCTTTTATCATGGATAGTATATAAACTACAGATCTATTACAATAATGATATAGATGAATTACAAGACAGTTAT
TACTCTTTTGAAAAGGAGTTGCAGGTTTGTCAACGCAGGGTTAGGCAATGCTTAGTTGAACTACAAAAAGCCGGTTTCAT
TGAAGTTGAAAATAGGACAATAATAAAAAACAACTTTAAGCTGCGTAATGTTCCATGTATAAAACTTCTAAAAAATTTTC
AGCGTTTCACTGAAAAAGAAACAAAAGGAGAAAAAATTATTGATCTAACCCAAAAAATTTTTCGCTCCAACCTGAAAGAA
ATTTCAGGTGAACCTGAAAAAAGTTTCAGGTACATATATAGATATAATAATAATAAAAAAAATAATAATAGATCTAGATC
TACTGAAGATAAGTTAGTAGAGAATGATCAAAATAAAAATGAAGATCAACAGCAAAATTTGAAGTTTAAATATACGGAAT
ATGATGATTTTATAGAAATTGAGTTAGTAGAAAATGAAAAAGAAAATCAACAGCAACAACAGAATTTGAATTTCTATGAG
CTTAGTGATGTTAGTAATGACAAGCCATCAAACAAGGATTATGAGCAAAATAGTGAGTTAGCAACTCCAGCTATTACTAA
AGATTCAGAGGTTGAAAAGAATGAATGCTATCCCAAAAGAAAAAGACTAGCAGATTATTATCCACTAACACCAGAAGATG
CAGTTATACTACAACGTATGTCTAGTAGAAGCTTCAACATATACTTCATAAATCAATTACTGTTGAAGTTATCAAATAAA
TATCCAAACCGTCATTTTGCAAATAAGATAGCAGTGCTAAACTATATGGCAAAAGCCTTAGCAAATGAATTACTAACTAC
TGATCAGGCTAATAGTGGAAATTTTAGATTTAATGATGTAGGAAGATTTAAAGAACAGTATCTAGCAAATATTGAATCTG
GTACAGATCGTAGTATGAAGGCTCAGTTGAAGCGTAAAATAGCTGGAGTCTTTGAAGCAGATATGGCTTATCAAATTTTA
ACATCTTGTGATTTTGGGGTAGCGGTTAAAAACAAATATTACATCAAGTTGCTTAAGAATATTACACTGTCAGATCATAT
TAAATTCAAGATACTACAGGAGGTACGAGCTGTGTATGGCAACGATATTGAGCAGTTACAAGTTATACCATTTGACGAAT
CAAAACAAGTTGCCAATAGCACAACTGAGTATCAAAAAACCACAGTTTTACAGCAACAAATAAGTGATGAAGATTACCTT
TCAGAACTTAGTAAAGAGCTAGGCTCCAACTCGACTTGGTACAAAGTACGAGAATCTTTAGTCACATGTTACGGTCAAGC
TATCGATAAATCATGGTTTAGCAAATTAGAAGTTATAAACGAAGATAGTGTTAACAAAAAAATATTCATCAAAGCAAAAA
CAGAATTTGAAGATAGTTACATCAGAGAGAACTATCTGAAAGATCTTGAGCCCGCTTTTAAAGCTCAAGGATTTTCTTTC
GAGCTAGTTAAGTTTAGTAATTTTAATAAAATTTAA

Upstream 100 bases:

>100_bases
TAGCTACTAAATCGCTATATTTACGCGGTATAAAAACGTGGTTTTTGATAGAAAAATCGCCTGAACCACCTGCCATATCT
GACATTTTTGGAGGTTAGAA

Downstream 100 bases:

>100_bases
AGGGTGATATGGAAAAAGATCTTGCAAAGATTGCTCCAAATAATATTCAGGCAGAGCAAATGATACTTGGAGCAATTCTG
ATTAACAATCGTGCGCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 571; Mature: 570

Protein sequence:

>571_residues
MAQNLRNFASNNCKITNNNSSNNATVFYRFIGNFVPAEWKDLIGDNAKALSKTSKQLLSWIVYKLQIYYNNDIDELQDSY
YSFEKELQVCQRRVRQCLVELQKAGFIEVENRTIIKNNFKLRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKE
ISGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTEYDDFIEIELVENEKENQQQQQNLNFYE
LSDVSNDKPSNKDYEQNSELATPAITKDSEVEKNECYPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNK
YPNRHFANKIAVLNYMAKALANELLTTDQANSGNFRFNDVGRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYQIL
TSCDFGVAVKNKYYIKLLKNITLSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTTEYQKTTVLQQQISDEDYL
SELSKELGSNSTWYKVRESLVTCYGQAIDKSWFSKLEVINEDSVNKKIFIKAKTEFEDSYIRENYLKDLEPAFKAQGFSF
ELVKFSNFNKI

Sequences:

>Translated_571_residues
MAQNLRNFASNNCKITNNNSSNNATVFYRFIGNFVPAEWKDLIGDNAKALSKTSKQLLSWIVYKLQIYYNNDIDELQDSY
YSFEKELQVCQRRVRQCLVELQKAGFIEVENRTIIKNNFKLRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKE
ISGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTEYDDFIEIELVENEKENQQQQQNLNFYE
LSDVSNDKPSNKDYEQNSELATPAITKDSEVEKNECYPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNK
YPNRHFANKIAVLNYMAKALANELLTTDQANSGNFRFNDVGRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYQIL
TSCDFGVAVKNKYYIKLLKNITLSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTTEYQKTTVLQQQISDEDYL
SELSKELGSNSTWYKVRESLVTCYGQAIDKSWFSKLEVINEDSVNKKIFIKAKTEFEDSYIRENYLKDLEPAFKAQGFSF
ELVKFSNFNKI
>Mature_570_residues
AQNLRNFASNNCKITNNNSSNNATVFYRFIGNFVPAEWKDLIGDNAKALSKTSKQLLSWIVYKLQIYYNNDIDELQDSYY
SFEKELQVCQRRVRQCLVELQKAGFIEVENRTIIKNNFKLRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKEI
SGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTEYDDFIEIELVENEKENQQQQQNLNFYEL
SDVSNDKPSNKDYEQNSELATPAITKDSEVEKNECYPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSNKY
PNRHFANKIAVLNYMAKALANELLTTDQANSGNFRFNDVGRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYQILT
SCDFGVAVKNKYYIKLLKNITLSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTTEYQKTTVLQQQISDEDYLS
ELSKELGSNSTWYKVRESLVTCYGQAIDKSWFSKLEVINEDSVNKKIFIKAKTEFEDSYIRENYLKDLEPAFKAQGFSFE
LVKFSNFNKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67029; Mature: 66898

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNLRNFASNNCKITNNNSSNNATVFYRFIGNFVPAEWKDLIGDNAKALSKTSKQLLSW
CCCCHHHHHCCCCEEECCCCCCCCEEEEEHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
IVYKLQIYYNNDIDELQDSYYSFEKELQVCQRRVRQCLVELQKAGFIEVENRTIIKNNFK
HHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCE
LRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKK
ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCC
NNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTEYDDFIEIELVENEKENQQQQQNLNFYE
CCCCCCCHHHHHHHCCCCCCCCHHHCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCEEE
LSDVSNDKPSNKDYEQNSELATPAITKDSEVEKNECYPKRKRLADYYPLTPEDAVILQRM
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCHHHHHHHH
SSRSFNIYFINQLLLKLSNKYPNRHFANKIAVLNYMAKALANELLTTDQANSGNFRFNDV
HCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHH
GRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYQILTSCDFGVAVKNKYYIKLLKN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHH
ITLSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTTEYQKTTVLQQQISDEDYL
CCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHCCHHHHHHHHHHHHHCCCHHHH
SELSKELGSNSTWYKVRESLVTCYGQAIDKSWFSKLEVINEDSVNKKIFIKAKTEFEDSY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHH
IRENYLKDLEPAFKAQGFSFELVKFSNFNKI
HHHHHHHHCCHHHHCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
AQNLRNFASNNCKITNNNSSNNATVFYRFIGNFVPAEWKDLIGDNAKALSKTSKQLLSW
CCCHHHHHCCCCEEECCCCCCCCEEEEEHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHH
IVYKLQIYYNNDIDELQDSYYSFEKELQVCQRRVRQCLVELQKAGFIEVENRTIIKNNFK
HHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCE
LRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKK
ECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCC
NNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTEYDDFIEIELVENEKENQQQQQNLNFYE
CCCCCCCHHHHHHHCCCCCCCCHHHCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCEEE
LSDVSNDKPSNKDYEQNSELATPAITKDSEVEKNECYPKRKRLADYYPLTPEDAVILQRM
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCHHHHHHHH
SSRSFNIYFINQLLLKLSNKYPNRHFANKIAVLNYMAKALANELLTTDQANSGNFRFNDV
HCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHH
GRFKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYQILTSCDFGVAVKNKYYIKLLKN
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHH
ITLSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTTEYQKTTVLQQQISDEDYL
CCCCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHCCHHHHHHHHHHHHHCCCHHHH
SELSKELGSNSTWYKVRESLVTCYGQAIDKSWFSKLEVINEDSVNKKIFIKAKTEFEDSY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHH
IRENYLKDLEPAFKAQGFSFELVKFSNFNKI
HHHHHHHHCCHHHHCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA