Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183427

Identifier: 189183427

GI number: 189183427

Start: 545689

End: 545868

Strand: Reverse

Name: 189183427

Synonym: OTT_0520

Alternate gene names: NA

Gene position: 545868-545689 (Counterclockwise)

Preceding gene: 189183428

Following gene: 189183421

Centisome position: 27.17

GC content: 30.56

Gene sequence:

>180_bases
TTGAGCTTGCAGCAATCAGGCATTAAAGGTAATATCATTACTAGTGCAGGAATTTCGAATTTGACAAATTATTCACCATT
TCCTGGTGAAAAAATCATCATTGCAGCAGATAATGATAGCAAAAATTCTATAACTAATAATACTGTAATTAAAGCTGCAA
AAATGTTAGAAATGAAGTGA

Upstream 100 bases:

>100_bases
AAGATCTTTCGGTAAAATCAGAGGATCATTTATAATAATAGCAAAACGAAATGCGAATGACCCTAATATAACAGTTATAG
CAGAAGGCGCCGAAACAGCA

Downstream 100 bases:

>100_bases
GCGATAACTTGTATAGTCAAACCACCAGAAAATGGTGATTTTAATAATCTGTTGCAAAGTTGTGGAGACCAGTCAATTAG
AGACATTATAGAACCTGAAA

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugal Transfer Protein TraA; MobA/MobL Family Protein

Number of amino acids: Translated: 59; Mature: 58

Protein sequence:

>59_residues
MSLQQSGIKGNIITSAGISNLTNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKMLEMK

Sequences:

>Translated_59_residues
MSLQQSGIKGNIITSAGISNLTNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKMLEMK
>Mature_58_residues
SLQQSGIKGNIITSAGISNLTNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKMLEMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6283; Mature: 6152

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQQSGIKGNIITSAGISNLTNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKMLEMK
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SLQQSGIKGNIITSAGISNLTNYSPFPGEKIIIAADNDSKNSITNNTVIKAAKMLEMK
CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA