Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183420

Identifier: 189183420

GI number: 189183420

Start: 537149

End: 537298

Strand: Reverse

Name: 189183420

Synonym: OTT_0513

Alternate gene names: NA

Gene position: 537298-537149 (Counterclockwise)

Preceding gene: 189183421

Following gene: 189183419

Centisome position: 26.74

GC content: 32.67

Gene sequence:

>150_bases
ATGGAGGAAAGACGCAAGATAACTAGAACTAGTGTAGATAAGGTAAAAGCAGCTACAAATAAAGTTGTAACCAATATGTT
AACAAGTGATAATGCTAATATTGAACTAGACAAGATAATGCCTGAAATCTTAGCATCATTAGGTTGCTAA

Upstream 100 bases:

>100_bases
GAACATACTTTTGATAATATCATACCAGATCTGACTGTAACATGGTCTAGGAAAGAAGGTAATGAAGTTAAAAAAGGATA
TTGCTAACGGAATAAATACA

Downstream 100 bases:

>100_bases
TAAGAAATACTGATAATAAACAGCTTATCTGAGAAATAAGGCCTGCTATATTCTATATTAGAGATTTTGCGAATTTTTGA
AAATCACAGAGTAGAATGAG

Product: putative integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MEERRKITRTSVDKVKAATNKVVTNMLTSDNANIELDKIMPEILASLGC

Sequences:

>Translated_49_residues
MEERRKITRTSVDKVKAATNKVVTNMLTSDNANIELDKIMPEILASLGC
>Mature_49_residues
MEERRKITRTSVDKVKAATNKVVTNMLTSDNANIELDKIMPEILASLGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5449; Mature: 5449

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEERRKITRTSVDKVKAATNKVVTNMLTSDNANIELDKIMPEILASLGC
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MEERRKITRTSVDKVKAATNKVVTNMLTSDNANIELDKIMPEILASLGC
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA