| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183326
Identifier: 189183326
GI number: 189183326
Start: 438170
End: 438493
Strand: Reverse
Name: 189183326
Synonym: OTT_0419
Alternate gene names: NA
Gene position: 438493-438170 (Counterclockwise)
Preceding gene: 189183327
Following gene: 189183325
Centisome position: 21.83
GC content: 37.04
Gene sequence:
>324_bases ATGCTAAAATTGAGGCTGAAGGTGATTATGCAAAATCAAAAATTATGTTGGGCATTATCGAGGCCGTTGAAGTATATGGG TTTGAGCATTGATGAATGGGGAGTAGTGCTAGCTGGAGTAGCTCCAGGAATTGTACTACTAAACAGCAGGCATGCTAAAT CAGGCCTAGCATTTATGGTTGGAGGAATTGCTCTATGTTATTGCTTTAAGAAATTTAAGAAGGTATCGGAGAATTTTTTG CTAAAAAGTTTTTTAGTAGCTAAAGGTTTATTGCTAGCTCCATTAGGATATTCAAGATTGCTGGGCAAAAAAGTTGGCAA ATAA
Upstream 100 bases:
>100_bases AGTTGTGGAGAAGAAAAATTGACAACAACTTAGCTAAGTAGTTACTCTACATTAGATTTTGTGAATTTTTGAAAATCACA GTAGCAGAATGAGAAATCTC
Downstream 100 bases:
>100_bases TGAATCATCTCTTTAAGCAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCTG GCTGCAGCTAATATAATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MLKLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKSGLAFMVGGIALCYCFKKFKKVSENFL LKSFLVAKGLLLAPLGYSRLLGKKVGK
Sequences:
>Translated_107_residues MLKLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKSGLAFMVGGIALCYCFKKFKKVSENFL LKSFLVAKGLLLAPLGYSRLLGKKVGK >Mature_107_residues MLKLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKSGLAFMVGGIALCYCFKKFKKVSENFL LKSFLVAKGLLLAPLGYSRLLGKKVGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11797; Mature: 11797
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKSGLAFMV CCEEEEEEHHCCCHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHH GGIALCYCFKKFKKVSENFLLKSFLVAKGLLLAPLGYSRLLGKKVGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MLKLRLKVIMQNQKLCWALSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKSGLAFMV CCEEEEEEHHCCCHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHH GGIALCYCFKKFKKVSENFLLKSFLVAKGLLLAPLGYSRLLGKKVGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA