| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is mjaIIIM [H]
Identifier: 189183253
GI number: 189183253
Start: 355858
End: 356670
Strand: Reverse
Name: mjaIIIM [H]
Synonym: OTT_0346
Alternate gene names: 189183253
Gene position: 356670-355858 (Counterclockwise)
Preceding gene: 189183254
Following gene: 189183250
Centisome position: 17.75
GC content: 31.0
Gene sequence:
>813_bases GTGTCAATAGCAATTTCTAATGAACCAAAGCCTTTTCTCCACTGGGTTGGAGGCAAAAGGAGAATTGTTAATAAATTAAT AGAGCATCTTCCTTCAGGGCCATACTATAATTACTATGAACCATTCCTTGGTGGAGGTGCTTTATTTTTTCAAGTTAGGC ATCTGTTTAAACAATGTTTTTTGTCTGATATTAATCTCGACTTAATTACTAGTTATCACGCTGTAAAAAAGAATCCAAAT GAAGTCAACAGATTACTGAATCTATATCACAAAAACCATTCTGAAAATTACTACTATAAAATAAGAGACAATTATTATAG TAATGATCCTAATGATATCACGGCAAAATTTATATATCTTAATAAATATTCCTTTAGGGGAATTTATAGGCTAAACAGAG ATGGTACATCTGCTCAAACATTTTCTGATAAGCGATATCTTAAGCTTCATATTGACTCTAGAATAAATAAATGCAGCAAA CTTTTAACTGGTACATCAATTTGTGCAATGGATTTTTCGTTTATAGAACCTAAAAAAGGTGACTTCGTTTATCTTGATCC ACCTTACCACCAATCAGGAGAAAGGTTCTACACTAGAGTTCCATTTGATGAAAAAGATCAAATTAGATTACGGGATTTTG TCCAAGAATTAACAAATAAAGGTGTTAAGATTATGATCTCAAATAATAATACTGCCTTTATTAGAGACTTATACAAAGAT TTTAATATCAATACCGTTACAGTCGTATACTCAATCAATGAACAACGCAATCCTGTTAATGAGCTAATCATTACTAACTA TAAAACTTGCTAG
Upstream 100 bases:
>100_bases AAAGATTTGCAAAAAAGCTCTGTAGCAGTTATTATTACTGGCTTTAAGGCTTGTTTTCTGCTATAATTCATAGTAGAGAT TTAATTAATCAAAAATTCTT
Downstream 100 bases:
>100_bases TTATTAAATGTGAACCCGCAATCCAAATCGTATATGAATAGGAAGTGGTCTATAGTTAGCCATTGTGCTCCATTCAATGT CTAAATATGTATCTCTTGAT
Product: N6 adenine-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.MjaIII; Adenine-specific methyltransferase MjaIII [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSIAISNEPKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPN EVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHIDSRINKCSK LLTGTSICAMDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDEKDQIRLRDFVQELTNKGVKIMISNNNTAFIRDLYKD FNINTVTVVYSINEQRNPVNELIITNYKTC
Sequences:
>Translated_270_residues MSIAISNEPKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPN EVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHIDSRINKCSK LLTGTSICAMDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDEKDQIRLRDFVQELTNKGVKIMISNNNTAFIRDLYKD FNINTVTVVYSINEQRNPVNELIITNYKTC >Mature_269_residues SIAISNEPKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPNE VNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHIDSRINKCSKL LTGTSICAMDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDEKDQIRLRDFVQELTNKGVKIMISNNNTAFIRDLYKDF NINTVTVVYSINEQRNPVNELIITNYKTC
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MjaIII endonuclease (Potential) [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=268, Percent_Identity=29.8507462686567, Blast_Score=91, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 31876; Mature: 31744
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAISNEPKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCF CEEEECCCCCHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH LSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYL HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEE NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHIDSRINKCSKLLTGTSICAMDFSFIEPKKG EEECCCEEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCEEEEECCHHCCCCCC DFVYLDPPYHQSGERFYTRVPFDEKDQIRLRDFVQELTNKGVKIMISNNNTAFIRDLYKD CEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH FNINTVTVVYSINEQRNPVNELIITNYKTC CCCCEEEEEEEECCCCCCHHHEEEECCCCC >Mature Secondary Structure SIAISNEPKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCF EEEECCCCCHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH LSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYL HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEE NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHIDSRINKCSKLLTGTSICAMDFSFIEPKKG EEECCCEEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCEEEEECCHHCCCCCC DFVYLDPPYHQSGERFYTRVPFDEKDQIRLRDFVQELTNKGVKIMISNNNTAFIRDLYKD CEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH FNINTVTVVYSINEQRNPVNELIITNYKTC CCCCEEEEEEEECCCCCCHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]