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The map label for this gene is traA [H]

Identifier: 189183242

GI number: 189183242

Start: 346978

End: 347688

Strand: Direct

Name: traA [H]

Synonym: OTT_0335

Alternate gene names: 189183242

Gene position: 346978-347688 (Clockwise)

Preceding gene: 189183241

Following gene: 189183243

Centisome position: 17.27

GC content: 33.61

Gene sequence:

>711_bases
ATGCAAGACAGCTTAATAGTAGTAGATGAAGCTGGAATGGTAGGTACTAAAGCTTATGCAGAGCTGTTTAGAGTAGTTAG
AAACAATAATTGTCAACTGATACTTGCTGGAGATGAAAAGCAGTTAGCTTCAATAGAAAGAGGTGGAATGTTTGAGATGC
TGAGTAATATTTTTGGTTCACATGTTTTAGTAAATATTCGAAGACAAAGTAAAAACTGGAGCAGAAAAGCAGCAATGGAG
TTTGCTGAGAGTAATATTTTAAGCGGTATAACCTTACTGAGGCAAAATAACTGCGTTAGGTTTGATAATACATTACAGGA
TTCAATTAGTAAGTTGATTTATGATTGGAGTCTAAGCAAGTTTAAGCTACATGAAAAATTGGTAATTACAGTACGTAATA
AAGATGTCGATATTCTTAATTCAAGTATTAGATCTTTGTTAAAAGCTAATGGCACGCTACAAGGCACAGAATATAGGCGT
TCAATTGCTGGAAGGAAAGAGTCCTATATGGCAGGAGATAGAATCGTATTTCAAAAAAGCGATAAGGATTTACAAATACA
AAACAGTGAATTTGCAACTTTAACTTCTGTTAATAAAAATGAATTTGTAGCTAAAACAGATGCAGGAAAAAGGGTGAGTT
TTGATTCGGTAAAATACAATTTAAACATGGCTATGCAAGTACTGTTTATAAGGTCCAGGGAGCTTCTATAA

Upstream 100 bases:

>100_bases
CTTGCTCCTACTCATAAGGCAGTATCAGAGCTGAGGAGCAAAGGTTATACAGAGGTCTATACAGTAAAAGGATTTTTATA
TAATCGAAAAAAAAATTTTT

Downstream 100 bases:

>100_bases
AAGATGTATACGTTTTGCATAATGGAATAAGTAATATAAGCAGCTCATACGTAGCTATGACAAGGCATATAGAGAACTTG
CAGCTATATTGCAATAAGGA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQDSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSKNWSRKAAME
FAESNILSGITLLRQNNCVRFDNTLQDSISKLIYDWSLSKFKLHEKLVITVRNKDVDILNSSIRSLLKANGTLQGTEYRR
SIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDAGKRVSFDSVKYNLNMAMQVLFIRSRELL

Sequences:

>Translated_236_residues
MQDSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSKNWSRKAAME
FAESNILSGITLLRQNNCVRFDNTLQDSISKLIYDWSLSKFKLHEKLVITVRNKDVDILNSSIRSLLKANGTLQGTEYRR
SIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDAGKRVSFDSVKYNLNMAMQVLFIRSRELL
>Mature_236_residues
MQDSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSKNWSRKAAME
FAESNILSGITLLRQNNCVRFDNTLQDSISKLIYDWSLSKFKLHEKLVITVRNKDVDILNSSIRSLLKANGTLQGTEYRR
SIAGRKESYMAGDRIVFQKSDKDLQIQNSEFATLTSVNKNEFVAKTDAGKRVSFDSVKYNLNMAMQVLFIRSRELL

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: NA

Molecular weight: Translated: 26816; Mature: 26816

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGS
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHCCC
HVLVNIRRQSKNWSRKAAMEFAESNILSGITLLRQNNCVRFDNTLQDSISKLIYDWSLSK
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEECCHHHHHHHHHHHHCCCCC
FKLHEKLVITVRNKDVDILNSSIRSLLKANGTLQGTEYRRSIAGRKESYMAGDRIVFQKS
EEECEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCEEEEEEC
DKDLQIQNSEFATLTSVNKNEFVAKTDAGKRVSFDSVKYNLNMAMQVLFIRSRELL
CCCEEEECCCEEEEEECCCCCEEEECCCCCEEEHHHEEEEHHHHHHHEEHHHHCCC
>Mature Secondary Structure
MQDSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGS
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHCCC
HVLVNIRRQSKNWSRKAAMEFAESNILSGITLLRQNNCVRFDNTLQDSISKLIYDWSLSK
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEECCHHHHHHHHHHHHCCCCC
FKLHEKLVITVRNKDVDILNSSIRSLLKANGTLQGTEYRRSIAGRKESYMAGDRIVFQKS
EEECEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCEEEEEEC
DKDLQIQNSEFATLTSVNKNEFVAKTDAGKRVSFDSVKYNLNMAMQVLFIRSRELL
CCCEEEECCCEEEEEECCCCCEEEECCCCCEEEHHHEEEEHHHHHHHEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]