Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183224

Identifier: 189183224

GI number: 189183224

Start: 329622

End: 330170

Strand: Direct

Name: 189183224

Synonym: OTT_0317

Alternate gene names: NA

Gene position: 329622-330170 (Clockwise)

Preceding gene: 189183223

Following gene: 189183226

Centisome position: 16.41

GC content: 31.88

Gene sequence:

>549_bases
ATGAATGTTTTGAAATCACTTTTACAACAGTGTTATGCTGTAATGCTAATATCTGTTGTATTATTTTCACCATCGATATG
TACAGCGAATAATAATGTAAACTTCAATGCTTTCAAAGATAGTATTGATACTTCACAATTCTATATAAAATTTTCAACTG
GTATTGCTACTAACTACGACACATTAGAAGCTGGAATTGGTTATAGATTAGATCGGCACAGAATGGATGTAAGATTAGGA
TTTATGTGTCATCACAACTGTAGAGATAACTTTGTTCAAGGAAATTATTATTACAATATAATTGAAGGTAACAAAGCATC
AATTTTTGTTACAGGTGGCCTAGAATCAGCTTTCAATAGTGATAGCGGTACTGGTATAGACTTGGGAGTTGGTACAACAA
TAAACTTATCAAGAGATACATATTTAGACGGAGTTGGTACAACAATAAATTTATCAAGAGATACATATTTAGACATTGAA
TGCAGCACAATTGCTAACTATAGACCACTTCCTATTCATATACGATTTGGATGGCGGGTTCACATTTAA

Upstream 100 bases:

>100_bases
GGTAATGCAGATATATTCAACTTTCTAACGGAACAATCTGTACCATGGTATTAGGTTTTAACAGATAGCTAATATGTTAA
CATTAAAAAGAGAAGTTAAT

Downstream 100 bases:

>100_bases
TAACTAGCAAGTTTTATAGTTAGTAATGATTAGTTCATTAACAGGATTGCGTTGTTCATTGATTGAGTATACGACTGTAA
CGGTATTGATATTAAAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNVLKSLLQQCYAVMLISVVLFSPSICTANNNVNFNAFKDSIDTSQFYIKFSTGIATNYDTLEAGIGYRLDRHRMDVRLG
FMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGGLESAFNSDSGTGIDLGVGTTINLSRDTYLDGVGTTINLSRDTYLDIE
CSTIANYRPLPIHIRFGWRVHI

Sequences:

>Translated_182_residues
MNVLKSLLQQCYAVMLISVVLFSPSICTANNNVNFNAFKDSIDTSQFYIKFSTGIATNYDTLEAGIGYRLDRHRMDVRLG
FMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGGLESAFNSDSGTGIDLGVGTTINLSRDTYLDGVGTTINLSRDTYLDIE
CSTIANYRPLPIHIRFGWRVHI
>Mature_182_residues
MNVLKSLLQQCYAVMLISVVLFSPSICTANNNVNFNAFKDSIDTSQFYIKFSTGIATNYDTLEAGIGYRLDRHRMDVRLG
FMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGGLESAFNSDSGTGIDLGVGTTINLSRDTYLDGVGTTINLSRDTYLDIE
CSTIANYRPLPIHIRFGWRVHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20406; Mature: 20406

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLKSLLQQCYAVMLISVVLFSPSICTANNNVNFNAFKDSIDTSQFYIKFSTGIATNYD
CHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCCC
TLEAGIGYRLDRHRMDVRLGFMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGGLESAFNS
HHHCCCCEEECCEEEEEEEEEEEECCCCCCEEECCEEEEEEECCCEEEEEECCCCHHCCC
DSGTGIDLGVGTTINLSRDTYLDGVGTTINLSRDTYLDIECSTIANYRPLPIHIRFGWRV
CCCCEEEEECCCEEEECCCCEECCCCCEEEECCCEEEEEEEHHCCCCCCCEEEEEEEEEE
HI
EC
>Mature Secondary Structure
MNVLKSLLQQCYAVMLISVVLFSPSICTANNNVNFNAFKDSIDTSQFYIKFSTGIATNYD
CHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCCC
TLEAGIGYRLDRHRMDVRLGFMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGGLESAFNS
HHHCCCCEEECCEEEEEEEEEEEECCCCCCEEECCEEEEEEECCCEEEEEECCCCHHCCC
DSGTGIDLGVGTTINLSRDTYLDGVGTTINLSRDTYLDIECSTIANYRPLPIHIRFGWRV
CCCCEEEEECCCEEEECCCCEECCCCCEEEECCCEEEEEEEHHCCCCCCCEEEEEEEEEE
HI
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA