Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183211

Identifier: 189183211

GI number: 189183211

Start: 318669

End: 319436

Strand: Reverse

Name: 189183211

Synonym: OTT_0304

Alternate gene names: NA

Gene position: 319436-318669 (Counterclockwise)

Preceding gene: 189183225

Following gene: 189183210

Centisome position: 15.9

GC content: 33.72

Gene sequence:

>768_bases
ATGAGGGATGTTTATAGTTTTATTACAAAAGCGGTTCAACAAGTTACATCCAACACTACTAGTTGGATGAAGGATTGCAT
GCTTATTCCAGGTGACAGTATCAGCGAAGTATTGATTTCTGGTGCTGATGCTGCTGGTAAGATCGCTTTCAAATGTTACA
GCATATGTGGACGTATGTTTATTAATTATCTGAATAAATTTAATAGTAGTTATATCAATAGCATTGATGGTCCTTATAGT
CCTATGACAGTTTTACACAGCATTGCTTCTGATGAATTTGGCGTCATCAAGTATAGCCCAAACTTGAATTTAATTTTTCC
TGCTAATTTTACGTCAGTAATAAATGATAACAACATACTTGTCGCTAAAGTACATGCCAGTAATAATTATGACATAAATG
CTACTCTAATAGAGTGGAGCAGACAAGGATGTAAAGTAATATCAGAGTGTAGTATAGAGTTATTAGTAGATAGTTATAAT
GAAATGAATGCTAATAATGATGAAAGCAATTTGTCAACAGCGTCATGGATATTGGGAGGATCATGTGTATTAGCTGCTGC
TGGTGGCATTGCTGCTTTGGTAGCATACAAAAAAACCAAAAAAAATGCAGATATAAATATTAATATTGATCACATTGAAG
AAACGAAAAAGTACGAAAACATGCATGAGCTACCAATAATGGAAACAGTAATGAAAGTAGTAGCAGAAGATCAATATGAA
GTATTCGGAGCAGCAAAAGATAGTAGCGTAGAGATCGTAATATCTTAA

Upstream 100 bases:

>100_bases
AAATTAAAGTCAGAATGTTACCATAAATTAATTGATAATTATAAATTTATAACATAAAATTACTTCTATAAAATTTTAAT
TAATTAACGGAGTGATTGCA

Downstream 100 bases:

>100_bases
GTTTTTTTATCTATTTGGTATCAAAGTAGTATCACAGGCATAAATATTAAGATAGAAACATAGAAGAAATGCAAGAAGTA
TAATTTCTGTGTTTCTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMFINYLNKFNSSYINSIDGPYS
PMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNILVAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYN
EMNANNDESNLSTASWILGGSCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE
VFGAAKDSSVEIVIS

Sequences:

>Translated_255_residues
MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMFINYLNKFNSSYINSIDGPYS
PMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNILVAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYN
EMNANNDESNLSTASWILGGSCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE
VFGAAKDSSVEIVIS
>Mature_255_residues
MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMFINYLNKFNSSYINSIDGPYS
PMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNILVAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYN
EMNANNDESNLSTASWILGGSCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE
VFGAAKDSSVEIVIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28032; Mature: 28032

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMF
CCHHHHHHHHHHHHHHCCHHHHHHCCEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
INYLNKFNSSYINSIDGPYSPMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNIL
HHHHHHHCHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCHHEECCCCEE
VAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYNEMNANNDESNLSTASWILGG
EEEEECCCCCCEEEEEEEECHHHHHHHHHCCHHEEEECHHHCCCCCCCCCCCHHHHHHCC
SCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE
HHEEHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHH
VFGAAKDSSVEIVIS
EEECCCCCCEEEEEC
>Mature Secondary Structure
MRDVYSFITKAVQQVTSNTTSWMKDCMLIPGDSISEVLISGADAAGKIAFKCYSICGRMF
CCHHHHHHHHHHHHHHCCHHHHHHCCEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
INYLNKFNSSYINSIDGPYSPMTVLHSIASDEFGVIKYSPNLNLIFPANFTSVINDNNIL
HHHHHHHCHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCHHEECCCCEE
VAKVHASNNYDINATLIEWSRQGCKVISECSIELLVDSYNEMNANNDESNLSTASWILGG
EEEEECCCCCCEEEEEEEECHHHHHHHHHCCHHEEEECHHHCCCCCCCCCCCHHHHHHCC
SCVLAAAGGIAALVAYKKTKKNADININIDHIEETKKYENMHELPIMETVMKVVAEDQYE
HHEEHHHCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHH
VFGAAKDSSVEIVIS
EEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA