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The map label for this gene is intB [C]

Identifier: 189183189

GI number: 189183189

Start: 284984

End: 285757

Strand: Direct

Name: intB [C]

Synonym: OTT_0282

Alternate gene names: 189183189

Gene position: 284984-285757 (Clockwise)

Preceding gene: 189183188

Following gene: 189183190

Centisome position: 14.19

GC content: 31.27

Gene sequence:

>774_bases
ATGCCTTCAATATCATCATCATCAAAGTTTACAAAGCGGTCATTAAATAAAATTAAAATTCCTAAGGGAGAAACATTATT
AATTATCCACCATCCATATATAAGAGGACTTAAACTGAAAATCTCATGTACAGTCTGTGGAGGAAAAGTAAGAAAAACAT
GGATTTTAGAACAAAAATATAAAAACCAGAGTTTAAAAATAAGGATAGGGGAATTTCCATATTTATCTATTAAAGAAGCT
ATAAAAAAAGCAATAGAATTAAAGACATTAATGGCGAACGGAATAGATCCAAGAACAGTAAAACGTCAACAACAGATAGA
AGAAAATGAGAATCGTATAAAAGAAAGAGAAAGAAAAGCTAACGATATTACATTCAAAGAGCTGTGTTATAGGTATATTG
AAGAGTATGCCAAAATATATACTATAAACTGGGAAGAGTATACTGACAGAGTACATACTTATGCACAATCATTATATGGA
AAAAAGATAAGCCAGATTCGAATGAGTGATATTCAACAAATATTCAATGATATCAGCAAAGAGGGAAAATATGCGACAGC
AAATCTATTGCTAGCAACCTTACGCACTATGTTTAATAAGGCAATAAAATGGGGATTAATAGAAAACAATCCTACTCTAG
GAATAGAGCAGCATAAACTGCAAGCAAGAGAGAGACGTCTAAGTTACGATGAAATGGGAAGATTTTTAGAAGTATTATGC
GGAAAAACAACTCCGTTGATAAGAGATTTTGCATTACTAGCGTTATATACTTGA

Upstream 100 bases:

>100_bases
ATAAAAAATTTGATATCAAAAAAAGCATAATTTATATCGAATGTTTAATAAAACGTAATATATATTAATAATATCAACAT
TAATATTATGTGGGGTAATT

Downstream 100 bases:

>100_bases
GCTAGAAAAAGTAATGTATTAGAGATGGAATGGGACAATATAGATTTTAAAAGAAAAATATGGCATATACAAAAAACTAA
GAACGGAAAGGCACAAAATA

Product: putative integrase

Products: NA

Alternate protein names: Phage-Related Integrase

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MPSISSSSKFTKRSLNKIKIPKGETLLIIHHPYIRGLKLKISCTVCGGKVRKTWILEQKYKNQSLKIRIGEFPYLSIKEA
IKKAIELKTLMANGIDPRTVKRQQQIEENENRIKERERKANDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYG
KKISQIRMSDIQQIFNDISKEGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDEMGRFLEVLC
GKTTPLIRDFALLALYT

Sequences:

>Translated_257_residues
MPSISSSSKFTKRSLNKIKIPKGETLLIIHHPYIRGLKLKISCTVCGGKVRKTWILEQKYKNQSLKIRIGEFPYLSIKEA
IKKAIELKTLMANGIDPRTVKRQQQIEENENRIKERERKANDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYG
KKISQIRMSDIQQIFNDISKEGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDEMGRFLEVLC
GKTTPLIRDFALLALYT
>Mature_256_residues
PSISSSSKFTKRSLNKIKIPKGETLLIIHHPYIRGLKLKISCTVCGGKVRKTWILEQKYKNQSLKIRIGEFPYLSIKEAI
KKAIELKTLMANGIDPRTVKRQQQIEENENRIKERERKANDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYGK
KISQIRMSDIQQIFNDISKEGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDEMGRFLEVLCG
KTTPLIRDFALLALYT

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30116; Mature: 29984

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSISSSSKFTKRSLNKIKIPKGETLLIIHHPYIRGLKLKISCTVCGGKVRKTWILEQKY
CCCCCCCCHHHHHHHCEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHH
KNQSLKIRIGEFPYLSIKEAIKKAIELKTLMANGIDPRTVKRQQQIEENENRIKERERKA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYGKKISQIRMSDIQQIFNDISK
CCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDEMGRFLEVLC
CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
GKTTPLIRDFALLALYT
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PSISSSSKFTKRSLNKIKIPKGETLLIIHHPYIRGLKLKISCTVCGGKVRKTWILEQKY
CCCCCCCHHHHHHHCEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHH
KNQSLKIRIGEFPYLSIKEAIKKAIELKTLMANGIDPRTVKRQQQIEENENRIKERERKA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYGKKISQIRMSDIQQIFNDISK
CCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDEMGRFLEVLC
CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
GKTTPLIRDFALLALYT
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA