Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183188

Identifier: 189183188

GI number: 189183188

Start: 284210

End: 284668

Strand: Direct

Name: 189183188

Synonym: OTT_0281

Alternate gene names: NA

Gene position: 284210-284668 (Clockwise)

Preceding gene: 189183187

Following gene: 189183189

Centisome position: 14.15

GC content: 27.89

Gene sequence:

>459_bases
ATGCGTCCTGTAGTATTCGATTTTTTAACTAATAGTTGTAATATTATTAGTAACAATAATGACACGATATTTTATAACTT
TATTGGAAATATCATTCCGCCAGAATGGAGAAAGCTAACTGGAGATAATGGAAAAGCATTAAGCAAGACATCTAAACAGC
TTTTATCATTTATAGTATTTAGACTATATATCTATTACAACAAAGATATAGATGAATTACAGGAAAGTTATCAGCTTTAT
GAGGATAAGCTAAATGTTGGTCAAAGAAGAGTTAGGCAATGCTTAGTAGAATTAAGAGATGCAGGTTTTATTGAAGTTGA
AAATAGGACAATAATTAAAGACAATGTTAAGTTAGGTAATGTGCCTTGTATTAAACATTACCTAATAATAAAGCTACAAA
GACATATCAAATATAAGGAAGAAGAGAAGTTAATTTTTATTAACTTCTACACTTTATAG

Upstream 100 bases:

>100_bases
TAAAAATTATTTTCAACCTTTGGCATAAAAATTTGATGGTAATCTGTAAAAAAATTATTTTCTAAAACACCTACTATAGC
TGTATTTTTGGAGGTGAAAA

Downstream 100 bases:

>100_bases
AACCTACTATTAACTTATGTTAACTTTTATTAACATTTATAATTAATCTTCAACTTTAACTATAAATATATTTGCAATAT
TTGTCAATATAACAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLYIYYNKDIDELQESYQLY
EDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGNVPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL

Sequences:

>Translated_152_residues
MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLYIYYNKDIDELQESYQLY
EDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGNVPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL
>Mature_152_residues
MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLYIYYNKDIDELQESYQLY
EDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGNVPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18104; Mature: 18104

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVF
CCCEEEEECCCCCEEEECCCCEEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH
RLYIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCEECC
VPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVF
CCCEEEEECCCCCEEEECCCCEEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH
RLYIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCEECC
VPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA