| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183188
Identifier: 189183188
GI number: 189183188
Start: 284210
End: 284668
Strand: Direct
Name: 189183188
Synonym: OTT_0281
Alternate gene names: NA
Gene position: 284210-284668 (Clockwise)
Preceding gene: 189183187
Following gene: 189183189
Centisome position: 14.15
GC content: 27.89
Gene sequence:
>459_bases ATGCGTCCTGTAGTATTCGATTTTTTAACTAATAGTTGTAATATTATTAGTAACAATAATGACACGATATTTTATAACTT TATTGGAAATATCATTCCGCCAGAATGGAGAAAGCTAACTGGAGATAATGGAAAAGCATTAAGCAAGACATCTAAACAGC TTTTATCATTTATAGTATTTAGACTATATATCTATTACAACAAAGATATAGATGAATTACAGGAAAGTTATCAGCTTTAT GAGGATAAGCTAAATGTTGGTCAAAGAAGAGTTAGGCAATGCTTAGTAGAATTAAGAGATGCAGGTTTTATTGAAGTTGA AAATAGGACAATAATTAAAGACAATGTTAAGTTAGGTAATGTGCCTTGTATTAAACATTACCTAATAATAAAGCTACAAA GACATATCAAATATAAGGAAGAAGAGAAGTTAATTTTTATTAACTTCTACACTTTATAG
Upstream 100 bases:
>100_bases TAAAAATTATTTTCAACCTTTGGCATAAAAATTTGATGGTAATCTGTAAAAAAATTATTTTCTAAAACACCTACTATAGC TGTATTTTTGGAGGTGAAAA
Downstream 100 bases:
>100_bases AACCTACTATTAACTTATGTTAACTTTTATTAACATTTATAATTAATCTTCAACTTTAACTATAAATATATTTGCAATAT TTGTCAATATAACAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLYIYYNKDIDELQESYQLY EDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGNVPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL
Sequences:
>Translated_152_residues MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLYIYYNKDIDELQESYQLY EDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGNVPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL >Mature_152_residues MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLYIYYNKDIDELQESYQLY EDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGNVPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18104; Mature: 18104
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVF CCCEEEEECCCCCEEEECCCCEEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH RLYIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCEECC VPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC >Mature Secondary Structure MRPVVFDFLTNSCNIISNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVF CCCEEEEECCCCCEEEECCCCEEEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHH RLYIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFIEVENRTIIKDNVKLGN HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCEECC VPCIKHYLIIKLQRHIKYKEEEKLIFINFYTL CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA