| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183175
Identifier: 189183175
GI number: 189183175
Start: 265943
End: 266467
Strand: Reverse
Name: 189183175
Synonym: OTT_0268
Alternate gene names: NA
Gene position: 266467-265943 (Counterclockwise)
Preceding gene: 189183178
Following gene: 189183169
Centisome position: 13.26
GC content: 28.57
Gene sequence:
>525_bases ATGATTGCTCTACTTGCATCAATAGTCGGATTTATTAGCTCCGTTGTTCCAGAAATACTAAAACTAATTAAAGATAAGAA TGAAAGGCAGCATACTATGGATATGCTTGACAAGAAAGCATATCTTGCTCACTGGTTACAAGAGAGTAGTTTAAAAAAAA TGGAATTTGCTAAAGATTTAGCTGAACATACTGCTATTATATACACAACGTACAAAACTGGTATAGTATGGATAGATGCA ATTAATGGTACTGTTAGGCCTATATTAGCATATAGCTTTTTCTTTATGTATGCTATTATTAAAATTATACAATATAAATC TCTGACTATTCAATCAAAAATATATATTACAGAATTTATAAATATATTATGGACTAGCGATGATCAAGCGATTTTTGCTG GTATTATTAGTTTTTATTTCGGACAACGAACTTTCAGCAAACTAAGACATAAATCTGGACTTCAGCAACAACATCAAAAA ATTACTTTTAAATCAAAAAACAAATCAGGATCAAAATTAAAATAA
Upstream 100 bases:
>100_bases TCTTGCTTGTATTCTCTAGAGTACTCTAGTAGTTAGATAGATCCCTTGCAATTAATTATCTTATAAACAGAATAACTAAC TTTATAAATTATTAAAAAAT
Downstream 100 bases:
>100_bases TCATAATATAATAGACCATATACGCCAAATTAGACAAGAAAAAGCATGGATTTATAAAGACAATTTCAAATAAAAATTAA GAATAAAGAACCAATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MIALLASIVGFISSVVPEILKLIKDKNERQHTMDMLDKKAYLAHWLQESSLKKMEFAKDLAEHTAIIYTTYKTGIVWIDA INGTVRPILAYSFFFMYAIIKIIQYKSLTIQSKIYITEFINILWTSDDQAIFAGIISFYFGQRTFSKLRHKSGLQQQHQK ITFKSKNKSGSKLK
Sequences:
>Translated_174_residues MIALLASIVGFISSVVPEILKLIKDKNERQHTMDMLDKKAYLAHWLQESSLKKMEFAKDLAEHTAIIYTTYKTGIVWIDA INGTVRPILAYSFFFMYAIIKIIQYKSLTIQSKIYITEFINILWTSDDQAIFAGIISFYFGQRTFSKLRHKSGLQQQHQK ITFKSKNKSGSKLK >Mature_174_residues MIALLASIVGFISSVVPEILKLIKDKNERQHTMDMLDKKAYLAHWLQESSLKKMEFAKDLAEHTAIIYTTYKTGIVWIDA INGTVRPILAYSFFFMYAIIKIIQYKSLTIQSKIYITEFINILWTSDDQAIFAGIISFYFGQRTFSKLRHKSGLQQQHQK ITFKSKNKSGSKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20123; Mature: 20123
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIALLASIVGFISSVVPEILKLIKDKNERQHTMDMLDKKAYLAHWLQESSLKKMEFAKDL CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEHTAIIYTTYKTGIVWIDAINGTVRPILAYSFFFMYAIIKIIQYKSLTIQSKIYITEFI HHHHEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NILWTSDDQAIFAGIISFYFGQRTFSKLRHKSGLQQQHQKITFKSKNKSGSKLK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHCCCCCCCCCCC >Mature Secondary Structure MIALLASIVGFISSVVPEILKLIKDKNERQHTMDMLDKKAYLAHWLQESSLKKMEFAKDL CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEHTAIIYTTYKTGIVWIDAINGTVRPILAYSFFFMYAIIKIIQYKSLTIQSKIYITEFI HHHHEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NILWTSDDQAIFAGIISFYFGQRTFSKLRHKSGLQQQHQKITFKSKNKSGSKLK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA