| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183169
Identifier: 189183169
GI number: 189183169
Start: 261417
End: 261803
Strand: Reverse
Name: 189183169
Synonym: OTT_0262
Alternate gene names: NA
Gene position: 261803-261417 (Counterclockwise)
Preceding gene: 189183175
Following gene: 189183168
Centisome position: 13.03
GC content: 29.97
Gene sequence:
>387_bases ATGGCAAGCACTATTACACACTATCCTCAACATGTAGCTAATAGATTTGAGTTAGTATCTTTATCAGCGCACCTAGTAAT TGAACTAAATTCCGGTTCTAACATTATGGCATCTCATGCAAAAAAAGATAGCAATCTTATCATGACTGCTCTTAATGGAA TTTTAACAGAAGAAGTTAATATTCCTGAGCTGAGAGAAAAGCTTATTTTGAAACATCAGACTCAAAGTCATAATTACTTA TCTAAATTACAAAAAAATAAATTTAATAATGATCAAGAAGGATATTTTAACAACTTCGAAAGCGACTCTGAATTTGACAA CCAGCAAATATATCTGAGCAGTGAGAACTTAAGTATTATTAATGATGATGATACAAGAAAAATATAA
Upstream 100 bases:
>100_bases ATTAGCAGTAGCTATTAATTAAAAAATTATGTATTATTTATATTAACTATATTTTTTTAAGTTTAAGTTAATACATTAAA TTTTAATTATGGAGTATATT
Downstream 100 bases:
>100_bases AAAACAACTTAACAGCTATGGTTAGTCGTGAAGACATTATTAATCAAGTATCTTCTTATGATCTAACATTTAATAAAACT CTTGTAAACAAAGCTATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MASTITHYPQHVANRFELVSLSAHLVIELNSGSNIMASHAKKDSNLIMTALNGILTEEVNIPELREKLILKHQTQSHNYL SKLQKNKFNNDQEGYFNNFESDSEFDNQQIYLSSENLSIINDDDTRKI
Sequences:
>Translated_128_residues MASTITHYPQHVANRFELVSLSAHLVIELNSGSNIMASHAKKDSNLIMTALNGILTEEVNIPELREKLILKHQTQSHNYL SKLQKNKFNNDQEGYFNNFESDSEFDNQQIYLSSENLSIINDDDTRKI >Mature_127_residues ASTITHYPQHVANRFELVSLSAHLVIELNSGSNIMASHAKKDSNLIMTALNGILTEEVNIPELREKLILKHQTQSHNYLS KLQKNKFNNDQEGYFNNFESDSEFDNQQIYLSSENLSIINDDDTRKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14666; Mature: 14534
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTITHYPQHVANRFELVSLSAHLVIELNSGSNIMASHAKKDSNLIMTALNGILTEEVN CCCCCCCCHHHHHHHEEEEEECEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCC IPELREKLILKHQTQSHNYLSKLQKNKFNNDQEGYFNNFESDSEFDNQQIYLSSENLSII CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE NDDDTRKI CCCCCCCC >Mature Secondary Structure ASTITHYPQHVANRFELVSLSAHLVIELNSGSNIMASHAKKDSNLIMTALNGILTEEVN CCCCCCCHHHHHHHEEEEEECEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHCCCCC IPELREKLILKHQTQSHNYLSKLQKNKFNNDQEGYFNNFESDSEFDNQQIYLSSENLSII CHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE NDDDTRKI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA