Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183142

Identifier: 189183142

GI number: 189183142

Start: 223065

End: 223721

Strand: Reverse

Name: 189183142

Synonym: OTT_0235

Alternate gene names: NA

Gene position: 223721-223065 (Counterclockwise)

Preceding gene: 189183143

Following gene: 189183141

Centisome position: 11.14

GC content: 29.22

Gene sequence:

>657_bases
ATGACTCCTATAGATCATGCTAATGAATACAGATGTATTCACTCTTCTAACGCAACAATCTGTCCTATAGTTATTAGTTT
TCAACAGACAGCTAATATGTTAATTCTAAAAAAAGAGAAGTTAATTATGAATGTTTTGAAATCACTTTTACAACCGTGTT
ATGCTGTTATGCTAGCATCTGTTGTATTATTTTTACCATCAATATGTACAGCAAATAATACAAACGCAGCTATATTATTT
TTTCCATCTACACATGTAGTGAATGATAATATAAAAATTGATTCTTCGCCATTTTACATAAAATTTTCAGCAGGTATTGT
TAATACAAGTCGTATATTAGAGGCAGGATTAGGTTACAGGCTAAATCGACATAGAATGGATATAAGACTAGGATTTATGG
TTAATATCCTTAAAGCATATAATTTTGTCCAAGGAAATTATTATTATAATATAATTACTGGTAATATAGGATCAATTTTT
GCTACAGGTGGCATAATGTCAGTTTTTAAGGAAGGTATTAGAGGAGAGTTGGGAATTGGCATAGCAGTAGATTTATATGA
TATATATTATACAGATATTGAATTTGGTGGTACATATAATAATAGCGATAATTCACTTCCTTTTTATATACGTTCTGGAT
TTCGTTTGCATTGTTGA

Upstream 100 bases:

>100_bases
GAGAAATACTACTACATATTGTTGCTCGTTATCAAAGAACAGATGTTATACAGCTTTTGATTGATTATGGTGCTGATATT
GATGTAAAAGATAAAACTGC

Downstream 100 bases:

>100_bases
ACGAAATGAGTTTAGTAGTTAGTAATGATTAGCTCATTAACGAGAACGAGATTTCGTTGTTCATTGATTGAGTACGTAAG
TCCAATATGAGTGATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLASVVLFLPSICTANNTNAAILF
FPSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYRLNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIF
ATGGIMSVFKEGIRGELGIGIAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC

Sequences:

>Translated_218_residues
MTPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLASVVLFLPSICTANNTNAAILF
FPSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYRLNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIF
ATGGIMSVFKEGIRGELGIGIAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC
>Mature_217_residues
TPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLASVVLFLPSICTANNTNAAILFF
PSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYRLNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIFA
TGGIMSVFKEGIRGELGIGIAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24397; Mature: 24265

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLAS
CCCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
VVLFLPSICTANNTNAAILFFPSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYR
HHHHHHHHCCCCCCCEEEEEECCCEEECCCEEECCCCEEEEEECCCCCHHHHHHHCCCCE
LNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIFATGGIMSVFKEGIRGELGIG
ECCEEEEEEHHHHHHHHHHHCEEECCEEEEEEECCCCCEEECCHHHHHHHHCCCCCCCCE
IAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC
EEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEECC
>Mature Secondary Structure 
TPIDHANEYRCIHSSNATICPIVISFQQTANMLILKKEKLIMNVLKSLLQPCYAVMLAS
CCCCCCCCEEEEECCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
VVLFLPSICTANNTNAAILFFPSTHVVNDNIKIDSSPFYIKFSAGIVNTSRILEAGLGYR
HHHHHHHHCCCCCCCEEEEEECCCEEECCCEEECCCCEEEEEECCCCCHHHHHHHCCCCE
LNRHRMDIRLGFMVNILKAYNFVQGNYYYNIITGNIGSIFATGGIMSVFKEGIRGELGIG
ECCEEEEEEHHHHHHHHHHHCEEECCEEEEEEECCCCCEEECCHHHHHHHHCCCCCCCCE
IAVDLYDIYYTDIEFGGTYNNSDNSLPFYIRSGFRLHC
EEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA