Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183092

Identifier: 189183092

GI number: 189183092

Start: 182339

End: 183085

Strand: Direct

Name: 189183092

Synonym: OTT_0185

Alternate gene names: NA

Gene position: 182339-183085 (Clockwise)

Preceding gene: 189183089

Following gene: 189183095

Centisome position: 9.08

GC content: 29.99

Gene sequence:

>747_bases
ATGCCAAGTAGCAATCAAAGGAACAGAGATGGAAAGTTGTCCTTAGCTGAGTTATTAACAGTAGTGATATATTTTTATTT
GTCTCCATGCAAGGATTGTAAAAATTATTATCTATATTACTTGAGTCATAAGTATAAAAGATACTTTTGTTTACCAAGCT
ATAGTATGATAATACAACTGTGGCCTAGAATGTTGCTACCGTTAGTCATATTAATGCATTATCTGAAAGGAGAAGAGACT
GGTATATATTACATCGATTCTACCAAGTTAGCAATTTGTCATAACAAACGTATTTTCAGCAATAGAGTTTTTAACAGATT
TTCTAAAATTGGTAAGAGTAGCTATGGCTGGTTCTTAGGTTTTAAGCTACATCTCGTAATTAATAATAAAGGTGAATTAA
TGTCAGTTAAAATTACTAAAGGCAATAAAAGCGATCTATCTGTAGCTTCACTTATTTCTAAAGGTTTATCTGGTAAATTG
TTTGGTGATAAAGCTTACATATCTAAAGCATTATTTCATCAACTGTTGACCAATGGTCTACGTTTATTTACTAATCTTCT
TAAAGATATGAAAACATATTTATTAGACATAGATGATAAGCGCTTATTAAATAAACGTTCGTTAATTGAGTCTGTCTTTA
ATGTACTAAAAAACCATATCCATTTAGAGCATACTCGACATCGCTCTCCTATTAATTTCTTTGTTCATATAATTGCTTCT
CTTGCTAGTTATAGTCATTTACAATGA

Upstream 100 bases:

>100_bases
AAAAAAGGAATAACTCAACATGAAAAAATGTATTATAACAGTATACTATTTAATAGATAATTTTTGCAAGATATATCAAG
AGTAGGAAAGAAAGAGATTA

Downstream 100 bases:

>100_bases
GGTTTGAGCATAAAAAAAGCGACAATAGCATCATAAGATTTACTAACATGATATTTTATACGCAAACTTCATTGTAAATG
ACTATATTCTATCTCCAAAC

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS; Protease

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQLWPRMLLPLVILMHYLKGEET
GIYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLGFKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKL
FGDKAYISKALFHQLLTNGLRLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIAS
LASYSHLQ

Sequences:

>Translated_248_residues
MPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQLWPRMLLPLVILMHYLKGEET
GIYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLGFKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKL
FGDKAYISKALFHQLLTNGLRLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIAS
LASYSHLQ
>Mature_247_residues
PSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQLWPRMLLPLVILMHYLKGEETG
IYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLGFKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKLF
GDKAYISKALFHQLLTNGLRLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIASL
ASYSHLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28913; Mature: 28782

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQL
CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEHEEECCCCEEEECCCHHHHHHH
WPRMLLPLVILMHYLKGEETGIYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLG
HHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEE
FKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKLFGDKAYISKALFHQLLTNGL
EEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIAS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LASYSHLQ
HHHHCCCC
>Mature Secondary Structure 
PSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQL
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEHEEECCCCEEEECCCHHHHHHH
WPRMLLPLVILMHYLKGEETGIYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLG
HHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEE
FKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKLFGDKAYISKALFHQLLTNGL
EEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIAS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LASYSHLQ
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA