| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183092
Identifier: 189183092
GI number: 189183092
Start: 182339
End: 183085
Strand: Direct
Name: 189183092
Synonym: OTT_0185
Alternate gene names: NA
Gene position: 182339-183085 (Clockwise)
Preceding gene: 189183089
Following gene: 189183095
Centisome position: 9.08
GC content: 29.99
Gene sequence:
>747_bases ATGCCAAGTAGCAATCAAAGGAACAGAGATGGAAAGTTGTCCTTAGCTGAGTTATTAACAGTAGTGATATATTTTTATTT GTCTCCATGCAAGGATTGTAAAAATTATTATCTATATTACTTGAGTCATAAGTATAAAAGATACTTTTGTTTACCAAGCT ATAGTATGATAATACAACTGTGGCCTAGAATGTTGCTACCGTTAGTCATATTAATGCATTATCTGAAAGGAGAAGAGACT GGTATATATTACATCGATTCTACCAAGTTAGCAATTTGTCATAACAAACGTATTTTCAGCAATAGAGTTTTTAACAGATT TTCTAAAATTGGTAAGAGTAGCTATGGCTGGTTCTTAGGTTTTAAGCTACATCTCGTAATTAATAATAAAGGTGAATTAA TGTCAGTTAAAATTACTAAAGGCAATAAAAGCGATCTATCTGTAGCTTCACTTATTTCTAAAGGTTTATCTGGTAAATTG TTTGGTGATAAAGCTTACATATCTAAAGCATTATTTCATCAACTGTTGACCAATGGTCTACGTTTATTTACTAATCTTCT TAAAGATATGAAAACATATTTATTAGACATAGATGATAAGCGCTTATTAAATAAACGTTCGTTAATTGAGTCTGTCTTTA ATGTACTAAAAAACCATATCCATTTAGAGCATACTCGACATCGCTCTCCTATTAATTTCTTTGTTCATATAATTGCTTCT CTTGCTAGTTATAGTCATTTACAATGA
Upstream 100 bases:
>100_bases AAAAAAGGAATAACTCAACATGAAAAAATGTATTATAACAGTATACTATTTAATAGATAATTTTTGCAAGATATATCAAG AGTAGGAAAGAAAGAGATTA
Downstream 100 bases:
>100_bases GGTTTGAGCATAAAAAAAGCGACAATAGCATCATAAGATTTACTAACATGATATTTTATACGCAAACTTCATTGTAAATG ACTATATTCTATCTCCAAAC
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS; Protease
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQLWPRMLLPLVILMHYLKGEET GIYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLGFKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKL FGDKAYISKALFHQLLTNGLRLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIAS LASYSHLQ
Sequences:
>Translated_248_residues MPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQLWPRMLLPLVILMHYLKGEET GIYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLGFKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKL FGDKAYISKALFHQLLTNGLRLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIAS LASYSHLQ >Mature_247_residues PSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQLWPRMLLPLVILMHYLKGEETG IYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLGFKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKLF GDKAYISKALFHQLLTNGLRLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIASL ASYSHLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28913; Mature: 28782
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQL CCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEHEEECCCCEEEECCCHHHHHHH WPRMLLPLVILMHYLKGEETGIYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLG HHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEE FKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKLFGDKAYISKALFHQLLTNGL EEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIAS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LASYSHLQ HHHHCCCC >Mature Secondary Structure PSSNQRNRDGKLSLAELLTVVIYFYLSPCKDCKNYYLYYLSHKYKRYFCLPSYSMIIQL CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEHEEECCCCEEEECCCHHHHHHH WPRMLLPLVILMHYLKGEETGIYYIDSTKLAICHNKRIFSNRVFNRFSKIGKSSYGWFLG HHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEE FKLHLVINNKGELMSVKITKGNKSDLSVASLISKGLSGKLFGDKAYISKALFHQLLTNGL EEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RLFTNLLKDMKTYLLDIDDKRLLNKRSLIESVFNVLKNHIHLEHTRHRSPINFFVHIIAS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LASYSHLQ HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA