| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183082
Identifier: 189183082
GI number: 189183082
Start: 171801
End: 172121
Strand: Direct
Name: 189183082
Synonym: OTT_0175
Alternate gene names: NA
Gene position: 171801-172121 (Clockwise)
Preceding gene: 189183081
Following gene: 189183083
Centisome position: 8.55
GC content: 26.79
Gene sequence:
>321_bases ATGAATTTTAAAAATTATTCACCATTTCCAGGTGAAAAAATCATCATTGCAGCAGATAATGATGGTAAAATTTCTCTAAC TAATAATACTGTAATTAAAGCTGTAAAAATATTAGAAATGAAGGAAGCGATAACTTGTATAGTCAAACCACAAGAAAATG GTGATTTTAATAATCTACTGCAAACTTGTTGTGCTCAGTCAATTAGAGACATTATAGAACCTGAAATTACTAAACTGACT AAAGTAGTTGAAACAACCAAACTTACTCAAACAGAAAATAATAAACAAAATGATATTACGAATGTTAAAGAATTTGTATA A
Upstream 100 bases:
>100_bases ATTGTATTTCAAACAAACGATAAGGATTTACAAATACAAAACAGTATTGAGCTTACAGCAATCATGAATTAAAGGCAATA TCATTGCTAGTGCAGGAGTT
Downstream 100 bases:
>100_bases TAAGTCGTCATCTCTATACTATTTTAAACAAGAAGAGGAAGCTAAGGTGGAAGCGATAGTAGCAAACAAATTTTTAGAAA ACCATACAGGAATTTATAGT
Product: putative conjugative transfer protein TraI
Products: NA
Alternate protein names: MobA/MobL Family Protein; Conjugal Transfer Protein TraA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MNFKNYSPFPGEKIIIAADNDGKISLTNNTVIKAVKILEMKEAITCIVKPQENGDFNNLLQTCCAQSIRDIIEPEITKLT KVVETTKLTQTENNKQNDITNVKEFV
Sequences:
>Translated_106_residues MNFKNYSPFPGEKIIIAADNDGKISLTNNTVIKAVKILEMKEAITCIVKPQENGDFNNLLQTCCAQSIRDIIEPEITKLT KVVETTKLTQTENNKQNDITNVKEFV >Mature_106_residues MNFKNYSPFPGEKIIIAADNDGKISLTNNTVIKAVKILEMKEAITCIVKPQENGDFNNLLQTCCAQSIRDIIEPEITKLT KVVETTKLTQTENNKQNDITNVKEFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11916; Mature: 11916
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKNYSPFPGEKIIIAADNDGKISLTNNTVIKAVKILEMKEAITCIVKPQENGDFNNLL CCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH QTCCAQSIRDIIEPEITKLTKVVETTKLTQTENNKQNDITNVKEFV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC >Mature Secondary Structure MNFKNYSPFPGEKIIIAADNDGKISLTNNTVIKAVKILEMKEAITCIVKPQENGDFNNLL CCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH QTCCAQSIRDIIEPEITKLTKVVETTKLTQTENNKQNDITNVKEFV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA