Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183081

Identifier: 189183081

GI number: 189183081

Start: 171302

End: 171772

Strand: Direct

Name: 189183081

Synonym: OTT_0174

Alternate gene names: NA

Gene position: 171302-171772 (Clockwise)

Preceding gene: 189183080

Following gene: 189183082

Centisome position: 8.53

GC content: 30.36

Gene sequence:

>471_bases
ATGACTGACAAAATCAATGATTCAAATAATTTCAATAATATTCATAATTCAAAAACAGATATAGAAAATTCTAAAGCTAA
CAGCTTGAACCACAACGTAGCTATAAAGTTGATAAATGGTGATATTGCTGATGGTATAGTGCTACTTAGTGATAATAATA
GCTTGAGAGCTGATAATACTCTAAAAGAATCAATAAACCAATTAATCAATGATTGGAAGAATAGTAAATTTGAGCCGCAT
GACCGCTTGATAATTGCTGACCATAAAGAAGCTGAAAATATTAATCAACACATCAGAAATTACATGAAGGAAAATGATGC
TCTGAAAGGTACAGAATACAGCATTTTAATTTCAGGAGTCGAATCAAAAAAATATGCTAACTACATGGCTGGAGACCGAA
TTGTATTTCAAACAAACGATAAGGATTTACAAATACAAAACAGTATTGAGCTTACAGCAATCATGAATTAA

Upstream 100 bases:

>100_bases
ATCTCAACAATCACTTAGCAATAAAATTATAATTCAAACGGTAAAAATAGCAAATATTTATACCGCAAAACAATTTAGTG
ATGCGAAGGTGAGGTTTTAT

Downstream 100 bases:

>100_bases
AGGCAATATCATTGCTAGTGCAGGAGTTATGAATTTTAAAAATTATTCACCATTTCCAGGTGAAAAAATCATCATTGCAG
CAGATAATGATGGTAAAATT

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugative Transfer Protein TraI; MobA/MobL Family Protein; Conjugal Transfer Protein TraA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTDKINDSNNFNNIHNSKTDIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNTLKESINQLINDWKNSKFEPH
DRLIIADHKEAENINQHIRNYMKENDALKGTEYSILISGVESKKYANYMAGDRIVFQTNDKDLQIQNSIELTAIMN

Sequences:

>Translated_156_residues
MTDKINDSNNFNNIHNSKTDIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNTLKESINQLINDWKNSKFEPH
DRLIIADHKEAENINQHIRNYMKENDALKGTEYSILISGVESKKYANYMAGDRIVFQTNDKDLQIQNSIELTAIMN
>Mature_155_residues
TDKINDSNNFNNIHNSKTDIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNTLKESINQLINDWKNSKFEPHD
RLIIADHKEAENINQHIRNYMKENDALKGTEYSILISGVESKKYANYMAGDRIVFQTNDKDLQIQNSIELTAIMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17716; Mature: 17585

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKINDSNNFNNIHNSKTDIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHH
LKESINQLINDWKNSKFEPHDRLIIADHKEAENINQHIRNYMKENDALKGTEYSILISGV
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
ESKKYANYMAGDRIVFQTNDKDLQIQNSIELTAIMN
CCHHHHHHCCCCEEEEEECCCCEEEECCEEEEEEEC
>Mature Secondary Structure 
TDKINDSNNFNNIHNSKTDIENSKANSLNHNVAIKLINGDIADGIVLLSDNNSLRADNT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCHH
LKESINQLINDWKNSKFEPHDRLIIADHKEAENINQHIRNYMKENDALKGTEYSILISGV
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
ESKKYANYMAGDRIVFQTNDKDLQIQNSIELTAIMN
CCHHHHHHCCCCEEEEEECCCCEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA