| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189182996
Identifier: 189182996
GI number: 189182996
Start: 93230
End: 93472
Strand: Direct
Name: 189182996
Synonym: OTT_0089
Alternate gene names: NA
Gene position: 93230-93472 (Clockwise)
Preceding gene: 189182995
Following gene: 189182997
Centisome position: 4.64
GC content: 28.4
Gene sequence:
>243_bases TTGTCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCCATGCAAGGATTGTAAAAATTATTATCTATA TTACTTGAGTTATAAGTATAAAGGATACTTTTGCTTACCAAGCTATAGTAGAATAATACAACTGTGTCATAGAATGTTGC TACCATTAGCAGTATTAATACATTATCTGAAAGGAGAAGAGACTGGTATATATTACATACCTTTCATGTTTAAGAGGATT TAA
Upstream 100 bases:
>100_bases AGAGGTCTACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGGGAGAGAAAGAGATTAATACCAAGTAGTAATC AAAGGAACAGAGATAGGAAG
Downstream 100 bases:
>100_bases CTAACAAGAAGAAATAAGTTAGATTAAGAGTTATTATGAGCTTTATACGCTTTATAAAATCTGCTATGTAGTTTATTTTC GTTTAAGTTGATATATGAAT
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI
Sequences:
>Translated_80_residues MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI >Mature_79_residues SLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9663; Mature: 9532
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLI CCHHHHHHHHHHHHHCCHHHCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIPFMFKRI HHHCCCCCCEEEHHHHHHCC >Mature Secondary Structure SLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLI CHHHHHHHHHHHHHCCHHHCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIPFMFKRI HHHCCCCCCEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA