Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189182996

Identifier: 189182996

GI number: 189182996

Start: 93230

End: 93472

Strand: Direct

Name: 189182996

Synonym: OTT_0089

Alternate gene names: NA

Gene position: 93230-93472 (Clockwise)

Preceding gene: 189182995

Following gene: 189182997

Centisome position: 4.64

GC content: 28.4

Gene sequence:

>243_bases
TTGTCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCCATGCAAGGATTGTAAAAATTATTATCTATA
TTACTTGAGTTATAAGTATAAAGGATACTTTTGCTTACCAAGCTATAGTAGAATAATACAACTGTGTCATAGAATGTTGC
TACCATTAGCAGTATTAATACATTATCTGAAAGGAGAAGAGACTGGTATATATTACATACCTTTCATGTTTAAGAGGATT
TAA

Upstream 100 bases:

>100_bases
AGAGGTCTACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGGGAGAGAAAGAGATTAATACCAAGTAGTAATC
AAAGGAACAGAGATAGGAAG

Downstream 100 bases:

>100_bases
CTAACAAGAAGAAATAAGTTAGATTAAGAGTTATTATGAGCTTTATACGCTTTATAAAATCTGCTATGTAGTTTATTTTC
GTTTAAGTTGATATATGAAT

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivative

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI

Sequences:

>Translated_80_residues
MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI
>Mature_79_residues
SLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLIHYLKGEETGIYYIPFMFKRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9663; Mature: 9532

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLI
CCHHHHHHHHHHHHHCCHHHCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH
HYLKGEETGIYYIPFMFKRI
HHHCCCCCCEEEHHHHHHCC
>Mature Secondary Structure 
SLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLPSYSRIIQLCHRMLLPLAVLI
CHHHHHHHHHHHHHCCHHHCCCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHH
HYLKGEETGIYYIPFMFKRI
HHHCCCCCCEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA