Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189182981

Identifier: 189182981

GI number: 189182981

Start: 77140

End: 77610

Strand: Reverse

Name: 189182981

Synonym: OTT_0074

Alternate gene names: NA

Gene position: 77610-77140 (Counterclockwise)

Preceding gene: 189182982

Following gene: 189182979

Centisome position: 3.86

GC content: 27.6

Gene sequence:

>471_bases
ATGAAAAGACTATCATTAATATTACTATTTCCAGTATCCTGCATTCTCTTTATAAATATATGTTGTGCTAATTCTTGCAA
TATTACAGACGATAAGACCTCTACTACTGTTAATGCTAATAATATCTCAACAGAGCAAAAAATCAGCAACCTAGCACAAC
GTTATTCTTTAATTCTTGTTACAGACCCTAGATGCAGGTATTGTCAAAGTTTTAAGCCTACATTTTATCAATTTGTTGAA
AAATATAAATTTAAGAATGATGTAATTCAAATAAGTATGTCAAATATTACTCAAACTTACAGAAGATTAATTAATAAAAT
AAAAGCTGTACCTACAGTAATATTACTTGATCAATCTGGTGATCAAAGTACTATATTTAGTCAAGGCAATGTATCATTAC
AATATTTGGAGCAAGTAGCTATTCAAACATGTGAAAAAATATCACAAAAAATCAACTCTGAAGATCTATAA

Upstream 100 bases:

>100_bases
GACAATCAGAAGCATTATATCAATGATATTAAAAAACTAAGATATCATTAATCCAATACCATTAATTTATCAGAAATTCA
CAAATAAAACTAGATTAATT

Downstream 100 bases:

>100_bases
ATCATCATATATATTAGCATGAAAGCGAATATAATACATTACTGAAACTATAATTGCTAAACAAAACCATACGAGTGCAT
ATTGTAAATGGTTATTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKRLSLILLFPVSCILFINICCANSCNITDDKTSTTVNANNISTEQKISNLAQRYSLILVTDPRCRYCQSFKPTFYQFVE
KYKFKNDVIQISMSNITQTYRRLINKIKAVPTVILLDQSGDQSTIFSQGNVSLQYLEQVAIQTCEKISQKINSEDL

Sequences:

>Translated_156_residues
MKRLSLILLFPVSCILFINICCANSCNITDDKTSTTVNANNISTEQKISNLAQRYSLILVTDPRCRYCQSFKPTFYQFVE
KYKFKNDVIQISMSNITQTYRRLINKIKAVPTVILLDQSGDQSTIFSQGNVSLQYLEQVAIQTCEKISQKINSEDL
>Mature_156_residues
MKRLSLILLFPVSCILFINICCANSCNITDDKTSTTVNANNISTEQKISNLAQRYSLILVTDPRCRYCQSFKPTFYQFVE
KYKFKNDVIQISMSNITQTYRRLINKIKAVPTVILLDQSGDQSTIFSQGNVSLQYLEQVAIQTCEKISQKINSEDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17823; Mature: 17823

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSLILLFPVSCILFINICCANSCNITDDKTSTTVNANNISTEQKISNLAQRYSLILV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHEEEEE
TDPRCRYCQSFKPTFYQFVEKYKFKNDVIQISMSNITQTYRRLINKIKAVPTVILLDQSG
ECCCHHHHHCCCHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCC
DQSTIFSQGNVSLQYLEQVAIQTCEKISQKINSEDL
CCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRLSLILLFPVSCILFINICCANSCNITDDKTSTTVNANNISTEQKISNLAQRYSLILV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHEEEEE
TDPRCRYCQSFKPTFYQFVEKYKFKNDVIQISMSNITQTYRRLINKIKAVPTVILLDQSG
ECCCHHHHHCCCHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCC
DQSTIFSQGNVSLQYLEQVAIQTCEKISQKINSEDL
CCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA