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The map label for this gene is gatC [H]

Identifier: 189026242

GI number: 189026242

Start: 1112907

End: 1113350

Strand: Direct

Name: gatC [H]

Synonym: TPASS_1019

Alternate gene names: 189026242

Gene position: 1112907-1113350 (Clockwise)

Preceding gene: 189026241

Following gene: 189026243

Centisome position: 97.67

GC content: 54.05

Gene sequence:

>444_bases
GTGCACGGGCGTCCGTGCAGGTTTGCATCGGCTGCAGTGACTCTCCTACCTCCCTATTCTAGTCCGGCGATATTGGTCAA
CAAGGCACATGGGAGTATCATGGCACAACAGCGTATTACGTCTGATATCTTTGCTCAGCTGCTCACCCTTTCTCACCTCG
AAAGCAGCGAGTGTGCAGTAGGACTTGCAACACAGATCGAGGACATTATCCAGTATTTTTCCGTTGTAGAACAGTTCGAC
CCCGGTCCACGCGACGATCCTGACACGGATAACGCACAAGGCCGTTGCTCCCAGGGGAATAAAATTGACGTGGACTGCTG
CCCGGACTGGGTACGCAAGGATGTCGCATTACCTGGTCTTTCCGTTCACGATCTCAAGCGGTTGTCCACAGAGTTTGCTG
ACGGTTACTTTCGCGCACCGCGCGCGCTCGATGGTAGCGCATAA

Upstream 100 bases:

>100_bases
AGAGAGCGACTTGAAGTATCCTGGGCGTATCCGGGTCACTCTTATTCGAGAAACGCGCGTCGTGGAGTATGCCCGCTGAG
CCTCAGGGAGAGGGGAGAGA

Downstream 100 bases:

>100_bases
ATGGACGCGCATGCTATTACCTGTGCAAGCTGGAATATGTTAAAGGCTCAGCTTGAAGCCGGTGCAATCAGCTCTTTGCA
GATTGTGCGTGCGTTTCGCA

Product: glu-tRNA amidotransferase, subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C [H]

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MHGRPCRFASAAVTLLPPYSSPAILVNKAHGSIMAQQRITSDIFAQLLTLSHLESSECAVGLATQIEDIIQYFSVVEQFD
PGPRDDPDTDNAQGRCSQGNKIDVDCCPDWVRKDVALPGLSVHDLKRLSTEFADGYFRAPRALDGSA

Sequences:

>Translated_147_residues
MHGRPCRFASAAVTLLPPYSSPAILVNKAHGSIMAQQRITSDIFAQLLTLSHLESSECAVGLATQIEDIIQYFSVVEQFD
PGPRDDPDTDNAQGRCSQGNKIDVDCCPDWVRKDVALPGLSVHDLKRLSTEFADGYFRAPRALDGSA
>Mature_147_residues
MHGRPCRFASAAVTLLPPYSSPAILVNKAHGSIMAQQRITSDIFAQLLTLSHLESSECAVGLATQIEDIIQYFSVVEQFD
PGPRDDPDTDNAQGRCSQGNKIDVDCCPDWVRKDVALPGLSVHDLKRLSTEFADGYFRAPRALDGSA

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.3.5.-

Molecular weight: Translated: 16004; Mature: 16004

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGRPCRFASAAVTLLPPYSSPAILVNKAHGSIMAQQRITSDIFAQLLTLSHLESSECAV
CCCCCCCHHHCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GLATQIEDIIQYFSVVEQFDPGPRDDPDTDNAQGRCSQGNKIDVDCCPDWVRKDVALPGL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCC
SVHDLKRLSTEFADGYFRAPRALDGSA
CHHHHHHHHHHHHCCHHCCCCCCCCCC
>Mature Secondary Structure
MHGRPCRFASAAVTLLPPYSSPAILVNKAHGSIMAQQRITSDIFAQLLTLSHLESSECAV
CCCCCCCHHHCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GLATQIEDIIQYFSVVEQFDPGPRDDPDTDNAQGRCSQGNKIDVDCCPDWVRKDVALPGL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCC
SVHDLKRLSTEFADGYFRAPRALDGSA
CHHHHHHHHHHHHCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]