| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189026039
Identifier: 189026039
GI number: 189026039
Start: 885180
End: 886163
Strand: Direct
Name: 189026039
Synonym: TPASS_0815
Alternate gene names: NA
Gene position: 885180-886163 (Clockwise)
Preceding gene: 189026038
Following gene: 189026048
Centisome position: 77.68
GC content: 52.13
Gene sequence:
>984_bases GTGTCTTTTGCAAAAGGGTCTGGCGGGGTCGTGCGCAGGTGTGCACTCGATCTTCCAGGAGCCTCTCGGGCCATGCACGC TTTCTGTCTCCTCTGTACCTCCGTCGTGGGGGACATAGTGTCTCGTCTCGTTCGCAACCTCGACGCGCATACCATTGATG AAGCCCTTGCCTTCGTTAAGTCGCGTGAAGCATTCAGTGTCAGCTTGGCGGAATATCTAAAAGCAGCTAAATGTTCTTTT TCCACGCGTGGTACCGCTCCCTTTATACGGGGCGGTAGCGTACTGTACCGAGATGCAGAACCGTGTGCAGTACTCCTGCT CACGCGCGCAGGGTTGCTTTTGCACAACAGTGAGCCAAACACAAACAGTGCGGCGATCTACCGTGCCTGCAAACGGCTGG TAACCGCGCAGGTGCGTTCGATTGTAGGTACAGAAATGCACACGTGCGTTATCGCACGCTCGATTTCAGGTATTACAACT CACGCGCAGCAGGAGCGATATTACCTACTGGTGCTGCCACTACACACACCACGTGTTGAATATGAGCAAAACAGTGCTCC ATTGCATATCCGGCGCGCACAGCTAAAAGATATGCGAGAGCTATTTCCTCTCCATATGCATTACAAACGTGAAGAAGTAC TGCCCGTAGGAAACAGTCCAAAACATAAGGCGACCGTGCGTACCCTGCACGCACATCTCCGTACACGCGTGATATTCCAC GCCTCAATAGGAGGACACATCGTTGCAAAGGCGCAAACAAACGCACATGGCTTTCATTGTCACCAAATTGGCGGGGTATA TACGGTGCCTGCATATCGCAACCGGGGCATTGCCACTGCATTGGTTGCAACGCTTGCGTATAACCGACTCGATATAGGAA AAACACCGGTGCTTTTCGTAAAGGTACGTAACATGGCAGCGCGGCGCGTATACGAAAAGATCGGCTTTACGCTACACGGA TTATACCGCGTCATTAATCTATAG
Upstream 100 bases:
>100_bases GGGTGTGCGTTTTTTATCCTTCGAGGGGAGGGTACTGTTCTCTCTCCCCATCCCCAACTCTTTCTGAGGAAGCTTTGGAG CTCGCGCTGGCTGCGACGGT
Downstream 100 bases:
>100_bases CGAAGCAAACAATAAAGACGTTAAAAGAGAAGAACACGGCAACGAAAGGGAAAGACAACGTCGCGTGACCTCTATTTTCC AAAAAAGCTACGTTGACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSFAKGSGGVVRRCALDLPGASRAMHAFCLLCTSVVGDIVSRLVRNLDAHTIDEALAFVKSREAFSVSLAEYLKAAKCSF STRGTAPFIRGGSVLYRDAEPCAVLLLTRAGLLLHNSEPNTNSAAIYRACKRLVTAQVRSIVGTEMHTCVIARSISGITT HAQQERYYLLVLPLHTPRVEYEQNSAPLHIRRAQLKDMRELFPLHMHYKREEVLPVGNSPKHKATVRTLHAHLRTRVIFH ASIGGHIVAKAQTNAHGFHCHQIGGVYTVPAYRNRGIATALVATLAYNRLDIGKTPVLFVKVRNMAARRVYEKIGFTLHG LYRVINL
Sequences:
>Translated_327_residues MSFAKGSGGVVRRCALDLPGASRAMHAFCLLCTSVVGDIVSRLVRNLDAHTIDEALAFVKSREAFSVSLAEYLKAAKCSF STRGTAPFIRGGSVLYRDAEPCAVLLLTRAGLLLHNSEPNTNSAAIYRACKRLVTAQVRSIVGTEMHTCVIARSISGITT HAQQERYYLLVLPLHTPRVEYEQNSAPLHIRRAQLKDMRELFPLHMHYKREEVLPVGNSPKHKATVRTLHAHLRTRVIFH ASIGGHIVAKAQTNAHGFHCHQIGGVYTVPAYRNRGIATALVATLAYNRLDIGKTPVLFVKVRNMAARRVYEKIGFTLHG LYRVINL >Mature_326_residues SFAKGSGGVVRRCALDLPGASRAMHAFCLLCTSVVGDIVSRLVRNLDAHTIDEALAFVKSREAFSVSLAEYLKAAKCSFS TRGTAPFIRGGSVLYRDAEPCAVLLLTRAGLLLHNSEPNTNSAAIYRACKRLVTAQVRSIVGTEMHTCVIARSISGITTH AQQERYYLLVLPLHTPRVEYEQNSAPLHIRRAQLKDMRELFPLHMHYKREEVLPVGNSPKHKATVRTLHAHLRTRVIFHA SIGGHIVAKAQTNAHGFHCHQIGGVYTVPAYRNRGIATALVATLAYNRLDIGKTPVLFVKVRNMAARRVYEKIGFTLHGL YRVINL
Specific function: Unknown
COG id: COG3393
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36195; Mature: 36064
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFAKGSGGVVRRCALDLPGASRAMHAFCLLCTSVVGDIVSRLVRNLDAHTIDEALAFVK CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SREAFSVSLAEYLKAAKCSFSTRGTAPFIRGGSVLYRDAEPCAVLLLTRAGLLLHNSEPN CCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEEECCCCHHHHHHHHCCEEEECCCCC TNSAAIYRACKRLVTAQVRSIVGTEMHTCVIARSISGITTHAQQERYYLLVLPLHTPRVE CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCCCC YEQNSAPLHIRRAQLKDMRELFPLHMHYKREEVLPVGNSPKHKATVRTLHAHLRTRVIFH CCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEE ASIGGHIVAKAQTNAHGFHCHQIGGVYTVPAYRNRGIATALVATLAYNRLDIGKTPVLFV ECCCCEEEEEEECCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE KVRNMAARRVYEKIGFTLHGLYRVINL EHHHHHHHHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure SFAKGSGGVVRRCALDLPGASRAMHAFCLLCTSVVGDIVSRLVRNLDAHTIDEALAFVK CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SREAFSVSLAEYLKAAKCSFSTRGTAPFIRGGSVLYRDAEPCAVLLLTRAGLLLHNSEPN CCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEEEECCCCHHHHHHHHCCEEEECCCCC TNSAAIYRACKRLVTAQVRSIVGTEMHTCVIARSISGITTHAQQERYYLLVLPLHTPRVE CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCCCC YEQNSAPLHIRRAQLKDMRELFPLHMHYKREEVLPVGNSPKHKATVRTLHAHLRTRVIFH CCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEE ASIGGHIVAKAQTNAHGFHCHQIGGVYTVPAYRNRGIATALVATLAYNRLDIGKTPVLFV ECCCCEEEEEEECCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE KVRNMAARRVYEKIGFTLHGLYRVINL EHHHHHHHHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA