Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

Click here to switch to the map view.

The map label for this gene is 189026028

Identifier: 189026028

GI number: 189026028

Start: 872630

End: 873838

Strand: Direct

Name: 189026028

Synonym: TPASS_0803

Alternate gene names: NA

Gene position: 872630-873838 (Clockwise)

Preceding gene: 189026027

Following gene: 189026029

Centisome position: 76.58

GC content: 49.38

Gene sequence:

>1209_bases
ATGGGCGCGCTAGCGTGTGACTACACCTATTCTCCGTCGCCAAAACGAGATCTCTCCATTGCAGCGAAAAATGCCGTCGT
CCGAAATATTCTGCAGGAGATTGCGATACACGGCTCCTTTCTTTTGCTCGGACATGAACATCCTGATGAAGACTGTATCG
CATCGTTAGTAGCCTTCGCACTCCTGCTCACGCGATGCAATAAACGCGTGGAAATTTGTTGTCAAGGTCCCATTCGTGTG
CAGATTTCATTCCTCATTGATATTTGTCTCTATAACGGAATTGCCGTGCATCTCGATACACAAACTGTCCCCCGTATGCC
GGATGCCCTGGTCATTCTAGACACCCCAAATCCCGGTATGATCTACGCGCCTCCGTCGTGCCGACTACTCCTTTCAGATT
CGACTATCCGTAAAATTGAACTTGACCATCACCTTTTTGCAAACGCTGCCTGCTGCGGTGATCCAGGCTACAGCCTTATC
GCACGCGCCTCTAGCACGTGCGAAATCATCGCTTATCTTTGTTACAAACTCGCGCGTAACCACGCGCAGCGCACTGCGCT
TGGGATACGCAATTTGTATTCACGCAATGTTGTGCTTTCAATACTCACCGGTATGATAGGGGATGCAAAGACAGGTGCTT
ATTTGATAAGTCGGAAAGACCGCGCGCTCTACACCTACTTCACCCAGAGGCTGAACACTATGCTCAGGGAAAAAACAAAA
CCGATTACCGGGAACATAGCATCCACCAAACAAATCCTCCATACCCTGGAGTCTCTGTCCGCTGAAGAACATGCGGTTTA
CCAAACAATGGTGAAAAACGTGCAACACCGCGGCAGTATTTCCCTGCTCCTTCTCAATCAGACACAAACACAGGCGTTGC
ACGAGTGTTGCAATGCAGAACATTTCGTTTCGTTGATAAAAATGGCGACCAGCAACATTGCAGAGAGTATCTCAGGTATC
GGTATCTCCGCGTATCCAGATCCAACACAGCAATTTTATGTCACGCAGTGGCGCGTGCGCACTGCCGCGCGGGTGAAACA
GTTGGATTTGCGTTTACTGCTATCTCATTTTGCTATTCAAAACGGCGGTGGACACGCCGGTGCCATCGGCTTCCGTTTCT
TTGCACACGAATTGATAAATCAAGATTTGTTTACCGAAGCGCTTGTCGCATATCTAGACGACCGCTTGCACCACATGCAG
AGCGCGTAA

Upstream 100 bases:

>100_bases
TTCACACGAGTAACAAGGGAGCAACATTACCCAGAAAATAATTGGGAGAACGGTCTCATTTGCCGCACACCAGCGGACAC
TCTATAGTATACTCGCCGTC

Downstream 100 bases:

>100_bases
CATGACAACACCACCTCCCGTTTGCGTAAGGAAAGTAGTGTGTTGCGCACCCGTGTTTCAAAAGGAATGTAAACGCTATG
GCAAAGGTTGAACTCAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MGALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFALLLTRCNKRVEICCQGPIRV
QISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGMIYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLI
ARASSTCEIIAYLCYKLARNHAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTK
PITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAEHFVSLIKMATSNIAESISGI
GISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQNGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQ
SA

Sequences:

>Translated_402_residues
MGALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFALLLTRCNKRVEICCQGPIRV
QISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGMIYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLI
ARASSTCEIIAYLCYKLARNHAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTK
PITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAEHFVSLIKMATSNIAESISGI
GISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQNGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQ
SA
>Mature_401_residues
GALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFALLLTRCNKRVEICCQGPIRVQ
ISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGMIYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLIA
RASSTCEIIAYLCYKLARNHAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTKP
ITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAEHFVSLIKMATSNIAESISGIG
ISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQNGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQS
A

Specific function: Unknown

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44578; Mature: 44447

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFA
CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
LLLTRCNKRVEICCQGPIRVQISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGM
HHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCE
IYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLIARASSTCEIIAYLCYKLARN
EECCCCCEEEECCCCEEEEEECHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH
HAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
PITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCHH
HFVSLIKMATSNIAESISGIGISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
NGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GALACDYTYSPSPKRDLSIAAKNAVVRNILQEIAIHGSFLLLGHEHPDEDCIASLVAFA
CCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
LLLTRCNKRVEICCQGPIRVQISFLIDICLYNGIAVHLDTQTVPRMPDALVILDTPNPGM
HHHHHCCCCEEEEECCCCEEEHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCE
IYAPPSCRLLLSDSTIRKIELDHHLFANAACCGDPGYSLIARASSTCEIIAYLCYKLARN
EECCCCCEEEECCCCEEEEEECHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHH
HAQRTALGIRNLYSRNVVLSILTGMIGDAKTGAYLISRKDRALYTYFTQRLNTMLREKTK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC
PITGNIASTKQILHTLESLSAEEHAVYQTMVKNVQHRGSISLLLLNQTQTQALHECCNAE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCHH
HFVSLIKMATSNIAESISGIGISAYPDPTQQFYVTQWRVRTAARVKQLDLRLLLSHFAIQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
NGGGHAGAIGFRFFAHELINQDLFTEALVAYLDDRLHHMQSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA