| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025987
Identifier: 189025987
GI number: 189025987
Start: 826520
End: 827701
Strand: Direct
Name: 189025987
Synonym: TPASS_0762
Alternate gene names: NA
Gene position: 826520-827701 (Clockwise)
Preceding gene: 189025986
Following gene: 189025989
Centisome position: 72.54
GC content: 57.7
Gene sequence:
>1182_bases GTGTGCAGCGCGCGCGTCACCCCGGACGTTGTGCTTCTGTTTGATCCACAATACTGGAACTATTTGCACGTAGCACGTGC GGTGGCGCCCCATGCACTGCTTATCACTGACATTTCTGTGTTCCCTGCAGTGTTTCGACTCCCGTGGGAGTACATTGTCC TTGCAGGTTCGGCATGCCCTTTCGCTACATCCCTTGCGCACCATGATGCCTCCTGCTCTCCTTCCCACGCTCTTCCTCTC CCTTTTGTCGCGCCCGATCTTCTCGCCTCAGGTGGGTCGGTTGCTACAAGTGCGTGGGAATGTGCCCGCTACTTGGGAGC GACAACCATAGTGTACATAGGGTTGGATCTGGCATTTCCTGGAGCGCGCACGCACTTTCGCGGAGCGCTGTTTGAGGAGC GGGCACACCTGCAATCGGGTCGAGTGGCTCCTGCCGAAACTACCTCCTTCTGTGCACTGCACTCCCTGCCCCTATATCCT GTCCCGGCTGCATCTGACCCCCATCCAGGAAAGAACTCCCCTGCTTCCCCTACCGGGGAGAACAAAGAGCAAACGGTGCT AACCGACGCGCGTTTTTCACTGTACGCCGTGTGGCTCGAAGCACACCTTGCGCGTTATACGCACATTAAAACGTATGCGC TTGAGCCTGCAGGAAGGAGAGTTGCAGGCATCACGCCCTTGCGCTTTTCCCAGCTTGTCACGTTACTCAACCGGTCTGCA GCTGTGCCGCACTGCCGGACCATGTATAGCCGCCGACGCAGGCTATACTCCCGGTATAGAAACAGCAGCGTGCAGGTCAA TTGCACCGATGCGGTGCGCTGGAGGCGCACGATGAAGAGTACACCTGTGCACTGTCTCGGTCATTTCACGAAGAAAAAGA AATCCGCAGAAGGTGCACGGAACCTATGGCGTGCTCTCAGACGTGCGGATACGCGGTGCGCTTCTCCCCATAACCTCGAG CACGCACTTGAGAGAACTCGTTCCTTCCTCAACGCGATGCCACTGACACCCACAACGTATGAAAACAAAACACATGCATT GTACACAGCGCTGTGCACGCTCCTCCCGACCGAGCCTACCTACCGCGCACGGGCACACGCACACCTCTTTGAACTCCTCA CCCGAACACTCAAGTTTTGCGCCGCCTATACCGAGGAGGAGGGGGAGTGGCGCGAGGCCTGA
Upstream 100 bases:
>100_bases CTCATCATTGCAGGTGGCCCTGGGGTGGATGCGAGTATATCGTTCCTTCCGTACCTAAAAAAAAAACACTGATTATTGCG GTTGATACCGCGTTGCGCGC
Downstream 100 bases:
>100_bases CATCCGGGGCCACTCAAAGACGTGTGTGGGGCGCAGGGGCAGGGCCCGTGCGTTCCCCCTTTCAGGGAAAGAGCCAAGCG CGTGCGTCCTGCATCAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACPFATSLAHHDASCSPSHALPL PFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFPGARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYP VPAASDPHPGKNSPASPTGENKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGARNLWRALRRADTRCASPHNLE HALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPTYRARAHAHLFELLTRTLKFCAAYTEEEGEWREA
Sequences:
>Translated_393_residues MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACPFATSLAHHDASCSPSHALPL PFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFPGARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYP VPAASDPHPGKNSPASPTGENKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGARNLWRALRRADTRCASPHNLE HALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPTYRARAHAHLFELLTRTLKFCAAYTEEEGEWREA >Mature_393_residues MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACPFATSLAHHDASCSPSHALPL PFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFPGARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYP VPAASDPHPGKNSPASPTGENKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGARNLWRALRRADTRCASPHNLE HALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPTYRARAHAHLFELLTRTLKFCAAYTEEEGEWREA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y762_TREPA (O83743)
Other databases:
- EMBL: AE000520 - PIR: E71285 - RefSeq: NP_219199.1 - ProteinModelPortal: O83743 - GeneID: 2611362 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0762 - NMPDR: fig|243276.1.peg.758 - TIGR: TP_0762 - HOGENOM: HBG732096 - ProtClustDB: CLSK2300294 - BioCyc: TPAL243276:TP_0762-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43865; Mature: 43865
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACP CCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHEEEECCCCC FATSLAHHDASCSPSHALPLPFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFP HHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEEECC GARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYPVPAASDPHPGKNSPASPTGE CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC NKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA CCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCHHHHHHHHHHHHCCC AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGAR CCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NLWRALRRADTRCASPHNLEHALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC YRARAHAHLFELLTRTLKFCAAYTEEEGEWREA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACP CCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHEEEECCCCC FATSLAHHDASCSPSHALPLPFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFP HHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEEECC GARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYPVPAASDPHPGKNSPASPTGE CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC NKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA CCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCHHHHHHHHHHHHCCC AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGAR CCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NLWRALRRADTRCASPHNLEHALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC YRARAHAHLFELLTRTLKFCAAYTEEEGEWREA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876