Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025987

Identifier: 189025987

GI number: 189025987

Start: 826520

End: 827701

Strand: Direct

Name: 189025987

Synonym: TPASS_0762

Alternate gene names: NA

Gene position: 826520-827701 (Clockwise)

Preceding gene: 189025986

Following gene: 189025989

Centisome position: 72.54

GC content: 57.7

Gene sequence:

>1182_bases
GTGTGCAGCGCGCGCGTCACCCCGGACGTTGTGCTTCTGTTTGATCCACAATACTGGAACTATTTGCACGTAGCACGTGC
GGTGGCGCCCCATGCACTGCTTATCACTGACATTTCTGTGTTCCCTGCAGTGTTTCGACTCCCGTGGGAGTACATTGTCC
TTGCAGGTTCGGCATGCCCTTTCGCTACATCCCTTGCGCACCATGATGCCTCCTGCTCTCCTTCCCACGCTCTTCCTCTC
CCTTTTGTCGCGCCCGATCTTCTCGCCTCAGGTGGGTCGGTTGCTACAAGTGCGTGGGAATGTGCCCGCTACTTGGGAGC
GACAACCATAGTGTACATAGGGTTGGATCTGGCATTTCCTGGAGCGCGCACGCACTTTCGCGGAGCGCTGTTTGAGGAGC
GGGCACACCTGCAATCGGGTCGAGTGGCTCCTGCCGAAACTACCTCCTTCTGTGCACTGCACTCCCTGCCCCTATATCCT
GTCCCGGCTGCATCTGACCCCCATCCAGGAAAGAACTCCCCTGCTTCCCCTACCGGGGAGAACAAAGAGCAAACGGTGCT
AACCGACGCGCGTTTTTCACTGTACGCCGTGTGGCTCGAAGCACACCTTGCGCGTTATACGCACATTAAAACGTATGCGC
TTGAGCCTGCAGGAAGGAGAGTTGCAGGCATCACGCCCTTGCGCTTTTCCCAGCTTGTCACGTTACTCAACCGGTCTGCA
GCTGTGCCGCACTGCCGGACCATGTATAGCCGCCGACGCAGGCTATACTCCCGGTATAGAAACAGCAGCGTGCAGGTCAA
TTGCACCGATGCGGTGCGCTGGAGGCGCACGATGAAGAGTACACCTGTGCACTGTCTCGGTCATTTCACGAAGAAAAAGA
AATCCGCAGAAGGTGCACGGAACCTATGGCGTGCTCTCAGACGTGCGGATACGCGGTGCGCTTCTCCCCATAACCTCGAG
CACGCACTTGAGAGAACTCGTTCCTTCCTCAACGCGATGCCACTGACACCCACAACGTATGAAAACAAAACACATGCATT
GTACACAGCGCTGTGCACGCTCCTCCCGACCGAGCCTACCTACCGCGCACGGGCACACGCACACCTCTTTGAACTCCTCA
CCCGAACACTCAAGTTTTGCGCCGCCTATACCGAGGAGGAGGGGGAGTGGCGCGAGGCCTGA

Upstream 100 bases:

>100_bases
CTCATCATTGCAGGTGGCCCTGGGGTGGATGCGAGTATATCGTTCCTTCCGTACCTAAAAAAAAAACACTGATTATTGCG
GTTGATACCGCGTTGCGCGC

Downstream 100 bases:

>100_bases
CATCCGGGGCCACTCAAAGACGTGTGTGGGGCGCAGGGGCAGGGCCCGTGCGTTCCCCCTTTCAGGGAAAGAGCCAAGCG
CGTGCGTCCTGCATCAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACPFATSLAHHDASCSPSHALPL
PFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFPGARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYP
VPAASDPHPGKNSPASPTGENKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA
AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGARNLWRALRRADTRCASPHNLE
HALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPTYRARAHAHLFELLTRTLKFCAAYTEEEGEWREA

Sequences:

>Translated_393_residues
MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACPFATSLAHHDASCSPSHALPL
PFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFPGARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYP
VPAASDPHPGKNSPASPTGENKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA
AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGARNLWRALRRADTRCASPHNLE
HALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPTYRARAHAHLFELLTRTLKFCAAYTEEEGEWREA
>Mature_393_residues
MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACPFATSLAHHDASCSPSHALPL
PFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFPGARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYP
VPAASDPHPGKNSPASPTGENKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA
AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGARNLWRALRRADTRCASPHNLE
HALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPTYRARAHAHLFELLTRTLKFCAAYTEEEGEWREA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y762_TREPA (O83743)

Other databases:

- EMBL:   AE000520
- PIR:   E71285
- RefSeq:   NP_219199.1
- ProteinModelPortal:   O83743
- GeneID:   2611362
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0762
- NMPDR:   fig|243276.1.peg.758
- TIGR:   TP_0762
- HOGENOM:   HBG732096
- ProtClustDB:   CLSK2300294
- BioCyc:   TPAL243276:TP_0762-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43865; Mature: 43865

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACP
CCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHEEEECCCCC
FATSLAHHDASCSPSHALPLPFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFP
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEEECC
GARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYPVPAASDPHPGKNSPASPTGE
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
NKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCHHHHHHHHHHHHCCC
AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGAR
CCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NLWRALRRADTRCASPHNLEHALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPT
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
YRARAHAHLFELLTRTLKFCAAYTEEEGEWREA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MCSARVTPDVVLLFDPQYWNYLHVARAVAPHALLITDISVFPAVFRLPWEYIVLAGSACP
CCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCHHHEEEECCCCC
FATSLAHHDASCSPSHALPLPFVAPDLLASGGSVATSAWECARYLGATTIVYIGLDLAFP
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEEECC
GARTHFRGALFEERAHLQSGRVAPAETTSFCALHSLPLYPVPAASDPHPGKNSPASPTGE
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
NKEQTVLTDARFSLYAVWLEAHLARYTHIKTYALEPAGRRVAGITPLRFSQLVTLLNRSA
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCHHHHHHHHHHHHCCC
AVPHCRTMYSRRRRLYSRYRNSSVQVNCTDAVRWRRTMKSTPVHCLGHFTKKKKSAEGAR
CCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NLWRALRRADTRCASPHNLEHALERTRSFLNAMPLTPTTYENKTHALYTALCTLLPTEPT
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
YRARAHAHLFELLTRTLKFCAAYTEEEGEWREA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876