| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is 189025986
Identifier: 189025986
GI number: 189025986
Start: 825613
End: 826491
Strand: Direct
Name: 189025986
Synonym: TPASS_0761
Alternate gene names: NA
Gene position: 825613-826491 (Clockwise)
Preceding gene: 189025985
Following gene: 189025987
Centisome position: 72.46
GC content: 53.81
Gene sequence:
>879_bases TTGAACTCAAACTCAAATAAAAAGCGAGATCCCGCGCGTTTCCCGGCCGGTGTTGCGCAAGGCTGCAGTACCACACGCGC AGGGGATCTGAAACACAGAAGAAAGCATCCCTTTGAGAAGTTTTTTGCGCAAAACAGCGCTCTTTTTGCCCAGCGGTTTC CAGATCTTGCACGTGCGCTGACACTTCCAAACGAGCAGCTCCTGCAACGCATCCCTCCTGATTACCTCCTTGCAGCGGCC CATGACGGAGACGCAACGCTTGCAGTACGGGGCACCTATCTCCACTCAAAATATCGGCCGCGGCAAGAGGCTGCACGTCT TATCAGCCAGGATTTTTTTACGCACGCGATTGCAAAAGGCGGCTATGTAGGTGCAGGTTTAGGTCTTGGCTATGTAGCAG AACTGTACGCGCAGCAGCACCCTACGCACACGGTAGTGCTTATCGAGCCAGATATATTCGTGTTCCTGCTTTTTTTAGCC AGTAGACCTCTCACTCCCCTCCTCCGACACGAACGTCTAAAAATACTGCCTGCACAGACGGTACCGGATGTGTTGCAGTT CCTGCGCGCCACGGGGGATGTGTCTCTCCCCCTGTTCCATTTCTTACCAGCCCAGGAGCTAAACACCGCGTGGTTTCACG ATTTTACCCAGGCGCACCGGCACGCAACTGCACAGGCAGAAACGAATAAGCAAACGCTGCAACGGTTCGGTCCGCTTTGG ATACGCAACACTATAAAAAATGCCGCACAGCTGTGTGTGCGCACGCCCGTAAATGCGCTGCGCAACTGCGCGGCAGGGAG TACTGCACTCATCATTGCAGGTGGCCCTGGGGTGGATGCGAGTATATCGTTCCTTCCGTACCTAAAAAAAAAACACTGA
Upstream 100 bases:
>100_bases ATTGCAAAACGCACCGACGTGCACCTTGTCCTTACAGGAGAAGGTTATGTGTACGAGCAGCATCCGCCTGCGGGCACACC TCTGACAAAAGGAATGACCA
Downstream 100 bases:
>100_bases TTATTGCGGTTGATACCGCGTTGCGCGCGTGTGCAGCGCGCGCGTCACCCCGGACGTTGTGCTTCTGTTTGATCCACAAT ACTGGAACTATTTGCACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MNSNSNKKRDPARFPAGVAQGCSTTRAGDLKHRRKHPFEKFFAQNSALFAQRFPDLARALTLPNEQLLQRIPPDYLLAAA HDGDATLAVRGTYLHSKYRPRQEAARLISQDFFTHAIAKGGYVGAGLGLGYVAELYAQQHPTHTVVLIEPDIFVFLLFLA SRPLTPLLRHERLKILPAQTVPDVLQFLRATGDVSLPLFHFLPAQELNTAWFHDFTQAHRHATAQAETNKQTLQRFGPLW IRNTIKNAAQLCVRTPVNALRNCAAGSTALIIAGGPGVDASISFLPYLKKKH
Sequences:
>Translated_292_residues MNSNSNKKRDPARFPAGVAQGCSTTRAGDLKHRRKHPFEKFFAQNSALFAQRFPDLARALTLPNEQLLQRIPPDYLLAAA HDGDATLAVRGTYLHSKYRPRQEAARLISQDFFTHAIAKGGYVGAGLGLGYVAELYAQQHPTHTVVLIEPDIFVFLLFLA SRPLTPLLRHERLKILPAQTVPDVLQFLRATGDVSLPLFHFLPAQELNTAWFHDFTQAHRHATAQAETNKQTLQRFGPLW IRNTIKNAAQLCVRTPVNALRNCAAGSTALIIAGGPGVDASISFLPYLKKKH >Mature_292_residues MNSNSNKKRDPARFPAGVAQGCSTTRAGDLKHRRKHPFEKFFAQNSALFAQRFPDLARALTLPNEQLLQRIPPDYLLAAA HDGDATLAVRGTYLHSKYRPRQEAARLISQDFFTHAIAKGGYVGAGLGLGYVAELYAQQHPTHTVVLIEPDIFVFLLFLA SRPLTPLLRHERLKILPAQTVPDVLQFLRATGDVSLPLFHFLPAQELNTAWFHDFTQAHRHATAQAETNKQTLQRFGPLW IRNTIKNAAQLCVRTPVNALRNCAAGSTALIIAGGPGVDASISFLPYLKKKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y761_TREPA (O83742)
Other databases:
- EMBL: AE000520 - PIR: D71285 - RefSeq: NP_219198.1 - ProteinModelPortal: O83742 - IntAct: O83742 - GeneID: 2611361 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0761 - NMPDR: fig|243276.1.peg.757 - TIGR: TP_0761 - HOGENOM: HBG732095 - ProtClustDB: CLSK2300293 - BioCyc: TPAL243276:TP_0761-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32412; Mature: 32412
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNSNKKRDPARFPAGVAQGCSTTRAGDLKHRRKHPFEKFFAQNSALFAQRFPDLARAL CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH TLPNEQLLQRIPPDYLLAAAHDGDATLAVRGTYLHSKYRPRQEAARLISQDFFTHAIAKG CCCCHHHHHHCCCCCEEEEECCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCC GYVGAGLGLGYVAELYAQQHPTHTVVLIEPDIFVFLLFLASRPLTPLLRHERLKILPAQT CCEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHCHHHCCCCCC VPDVLQFLRATGDVSLPLFHFLPAQELNTAWFHDFTQAHRHATAQAETNKQTLQRFGPLW HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH IRNTIKNAAQLCVRTPVNALRNCAAGSTALIIAGGPGVDASISFLPYLKKKH HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MNSNSNKKRDPARFPAGVAQGCSTTRAGDLKHRRKHPFEKFFAQNSALFAQRFPDLARAL CCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHH TLPNEQLLQRIPPDYLLAAAHDGDATLAVRGTYLHSKYRPRQEAARLISQDFFTHAIAKG CCCCHHHHHHCCCCCEEEEECCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCC GYVGAGLGLGYVAELYAQQHPTHTVVLIEPDIFVFLLFLASRPLTPLLRHERLKILPAQT CCEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHCHHHCCCCCC VPDVLQFLRATGDVSLPLFHFLPAQELNTAWFHDFTQAHRHATAQAETNKQTLQRFGPLW HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH IRNTIKNAAQLCVRTPVNALRNCAAGSTALIIAGGPGVDASISFLPYLKKKH HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876