| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025935
Identifier: 189025935
GI number: 189025935
Start: 778133
End: 780103
Strand: Direct
Name: 189025935
Synonym: TPASS_0710
Alternate gene names: NA
Gene position: 778133-780103 (Clockwise)
Preceding gene: 189025934
Following gene: 189025936
Centisome position: 68.29
GC content: 52.31
Gene sequence:
>1971_bases ATGAATACTCGCTTTGATCAAATTCGCCGCGATATGCAGAAACGCTACGAGGAGGATTCTAAGCGTGTCTGCGTCAGTGC GTGCGCAAAAACACTTGATAAGGCACTTGAGGCTGCTGCTGTTCAATTAGGAATACCGAAATACCGCGTTGAATACGAGG TGCTCGAAAGAGGCGCTGGCAGTTTCTTTTCCTTCCGCCAAAAAAAGTGGAAAATCCGCGCCTACGAGAGCTCTTCACTG GAGTTCGCTGCCGGGAACGTGTCTGCACCGCACGATTCACACCGGGACGTGTCTTCTTCCCCCAACACCGGACACGACGG CGCAGCCTTTGTACTTTGCAAAAAAGAGGGCGTTTTTTTAAAAATCACCGCTCCCCTCGGTAAAGGGCGCAAGGTTTCAC TCGCCAGCGTCCAGGAAAAGTTCCGCGCGCGCGGCCTTGCCCTGCCTCCCGCTGACACTCTCAAGGTGCTGATAAAAAAC GCTACGAACAGCTACGTGCACGTTTCTTCATTCGAACGTATCCCTGCACATGATGCAATGCTTTCTGTGGAGATCCGAGA AAACGACATGAAGGCCTTTGTAACTGCCACCCCCCCTGGACGGAACGGCGCTGACATATGCGCGGACACCATCTTGTCTT TCTTGCGCTCCAATCGGGTTGTGTACGGCATCGACATGGAACGCGTCAATTCGTTCCAAGACTGTCCGGTTTACCATGAA CCCTACCTCGTTGCACGGGGCACCCCTCCAAAGGACGGTGAAAATGCGAGGATTTCTTATCACTTCGAAACTGACCGCAC CCGTGTGCACTTGCAAGAGCTCAAGACGGGGAAGATTAACTTTAAGGAGTTAAACCTCATTCATAACGTGGTCAAAGGAC AGCCGCTTGCGCAGAAGCTGCCTGCACAGCGGGGTACTCCTGGCAAAACCGTCACGGGCACGTATCTTCCGGCACAGTCG GGAAAGGATGTGTCCATTCCTCTGGGAAGAAACACAGCGCTTGCGCGTGACGGCCTTACGGTCATTGCAGAAACTGACGG ACAAGCCCTGCTTTCCCGAAGGGGCATCAACGTAGAACCCATCTATGTGGTAGAAGGAAACGTCTCTGTAAAAACAGGGA ACATTATGTTCCTTGGTACCGTGTTGGTACACGGAAACGTTGAGGATAACTACGAGATTAAGGCCTCAGGCAACATCGAA GTGCGCGGAACGGTGGGAAAGGCCTTGCTTGATGCAGAAGGGGACATTCTAGTCGGACAAGGTATTGTGGGAAAGGAGGA AGGATGCGTTCGTGCAGGCAAATCTCTGTGGGCTAAATTCATCCAGAATTGCGCCTCAGTTGAAGCAGGAGATCTTGTCA TTGTTTCTGACGGAATTATGAACTCGCACGTCATTGCTAACCGGAAAATCATTTGTCGTGGGCGGCGTGCCGACATCATC GGAAGTAACGTTGCAGCGGCAGAGGCTGTCTACGCGCGCAACCTAGGCAGCCAATCAGGCGGCAACGACACGCAAATCAG CGTCGGCTTTGATCCGCACCGTGTACGTCGCCTCAGCATGTTGCAGGAAGAGTTGCACGCACATGAACGAAAACTCTCCG ATCTGTCTTTGAACCTCCAATCCCTCGAGAATTTAAAGAGAGCGCGTAAGGAACTTCCCCCAGATAAGGAGGCGCTTGAG ACTAGTCTGCATGAGGAAAAGATCTCACTCGAGCAGCTAGTGCAGCAGTCGCGCGCGGAGCTCGAAGAGATTCAGGCATC CTTGGATGCTTCTCCAATCGAGGGGAAAATCTCTGCCTCAGGACAGGTGTATTCTGGTGTAAAAGTCACCATTCGAGACG TGAGCGAAGAGGTGCGCGCGGACAGCACGGCCATAAGTTTTTATTTACGCAATGGCCTCATTCGCTATGGCCAATACACG GGCGAACAGGATGAAGATTATAAAAGAGCCCCTTCAGGTTATGCGTACTAA
Upstream 100 bases:
>100_bases AAGTGACCGAGTCGCGTATCTCTCAGATCCACACCAGCGCGAATTTAAAGTTAAAGGCAAAGCTCACCAACATCAAAAAG GGTATCCGGTAATACTCCCT
Downstream 100 bases:
>100_bases GTTTTCCTTATACGCAGCGAAAATGAGGAATACGCTATGCTGGTGATGTCGATTACGTTCTCTTTCGTGGCCGTTGCTCT GCTTGTGTACTTCTACGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Serine/Threonine Protein Kinase; Two-Component Fusion Protein
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MNTRFDQIRRDMQKRYEEDSKRVCVSACAKTLDKALEAAAVQLGIPKYRVEYEVLERGAGSFFSFRQKKWKIRAYESSSL EFAAGNVSAPHDSHRDVSSSPNTGHDGAAFVLCKKEGVFLKITAPLGKGRKVSLASVQEKFRARGLALPPADTLKVLIKN ATNSYVHVSSFERIPAHDAMLSVEIRENDMKAFVTATPPGRNGADICADTILSFLRSNRVVYGIDMERVNSFQDCPVYHE PYLVARGTPPKDGENARISYHFETDRTRVHLQELKTGKINFKELNLIHNVVKGQPLAQKLPAQRGTPGKTVTGTYLPAQS GKDVSIPLGRNTALARDGLTVIAETDGQALLSRRGINVEPIYVVEGNVSVKTGNIMFLGTVLVHGNVEDNYEIKASGNIE VRGTVGKALLDAEGDILVGQGIVGKEEGCVRAGKSLWAKFIQNCASVEAGDLVIVSDGIMNSHVIANRKIICRGRRADII GSNVAAAEAVYARNLGSQSGGNDTQISVGFDPHRVRRLSMLQEELHAHERKLSDLSLNLQSLENLKRARKELPPDKEALE TSLHEEKISLEQLVQQSRAELEEIQASLDASPIEGKISASGQVYSGVKVTIRDVSEEVRADSTAISFYLRNGLIRYGQYT GEQDEDYKRAPSGYAY
Sequences:
>Translated_656_residues MNTRFDQIRRDMQKRYEEDSKRVCVSACAKTLDKALEAAAVQLGIPKYRVEYEVLERGAGSFFSFRQKKWKIRAYESSSL EFAAGNVSAPHDSHRDVSSSPNTGHDGAAFVLCKKEGVFLKITAPLGKGRKVSLASVQEKFRARGLALPPADTLKVLIKN ATNSYVHVSSFERIPAHDAMLSVEIRENDMKAFVTATPPGRNGADICADTILSFLRSNRVVYGIDMERVNSFQDCPVYHE PYLVARGTPPKDGENARISYHFETDRTRVHLQELKTGKINFKELNLIHNVVKGQPLAQKLPAQRGTPGKTVTGTYLPAQS GKDVSIPLGRNTALARDGLTVIAETDGQALLSRRGINVEPIYVVEGNVSVKTGNIMFLGTVLVHGNVEDNYEIKASGNIE VRGTVGKALLDAEGDILVGQGIVGKEEGCVRAGKSLWAKFIQNCASVEAGDLVIVSDGIMNSHVIANRKIICRGRRADII GSNVAAAEAVYARNLGSQSGGNDTQISVGFDPHRVRRLSMLQEELHAHERKLSDLSLNLQSLENLKRARKELPPDKEALE TSLHEEKISLEQLVQQSRAELEEIQASLDASPIEGKISASGQVYSGVKVTIRDVSEEVRADSTAISFYLRNGLIRYGQYT GEQDEDYKRAPSGYAY >Mature_656_residues MNTRFDQIRRDMQKRYEEDSKRVCVSACAKTLDKALEAAAVQLGIPKYRVEYEVLERGAGSFFSFRQKKWKIRAYESSSL EFAAGNVSAPHDSHRDVSSSPNTGHDGAAFVLCKKEGVFLKITAPLGKGRKVSLASVQEKFRARGLALPPADTLKVLIKN ATNSYVHVSSFERIPAHDAMLSVEIRENDMKAFVTATPPGRNGADICADTILSFLRSNRVVYGIDMERVNSFQDCPVYHE PYLVARGTPPKDGENARISYHFETDRTRVHLQELKTGKINFKELNLIHNVVKGQPLAQKLPAQRGTPGKTVTGTYLPAQS GKDVSIPLGRNTALARDGLTVIAETDGQALLSRRGINVEPIYVVEGNVSVKTGNIMFLGTVLVHGNVEDNYEIKASGNIE VRGTVGKALLDAEGDILVGQGIVGKEEGCVRAGKSLWAKFIQNCASVEAGDLVIVSDGIMNSHVIANRKIICRGRRADII GSNVAAAEAVYARNLGSQSGGNDTQISVGFDPHRVRRLSMLQEELHAHERKLSDLSLNLQSLENLKRARKELPPDKEALE TSLHEEKISLEQLVQQSRAELEEIQASLDASPIEGKISASGQVYSGVKVTIRDVSEEVRADSTAISFYLRNGLIRYGQYT GEQDEDYKRAPSGYAY
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72023; Mature: 72023
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRFDQIRRDMQKRYEEDSKRVCVSACAKTLDKALEAAAVQLGIPKYRVEYEVLERGAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCC SFFSFRQKKWKIRAYESSSLEFAAGNVSAPHDSHRDVSSSPNTGHDGAAFVLCKKEGVFL HHHHHHHHCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEE KITAPLGKGRKVSLASVQEKFRARGLALPPADTLKVLIKNATNSYVHVSSFERIPAHDAM EEECCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCE LSVEIRENDMKAFVTATPPGRNGADICADTILSFLRSNRVVYGIDMERVNSFQDCPVYHE EEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCC PYLVARGTPPKDGENARISYHFETDRTRVHLQELKTGKINFKELNLIHNVVKGQPLAQKL CEEEECCCCCCCCCCCEEEEEEECCCCEEEHHHHCCCCCCHHHHHHHHHHHCCCCHHHHC PAQRGTPGKTVTGTYLPAQSGKDVSIPLGRNTALARDGLTVIAETDGQALLSRRGINVEP CCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEECCCEEEEEECCCHHHHHHCCCCCCE IYVVEGNVSVKTGNIMFLGTVLVHGNVEDNYEIKASGNIEVRGTVGKALLDAEGDILVGQ EEEEECCEEEEECCEEEEEEEEEECCCCCCEEEEECCCEEEEEECCHHHCCCCCCEEEEC GIVGKEEGCVRAGKSLWAKFIQNCASVEAGDLVIVSDGIMNSHVIANRKIICRGRRADII CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCEEEEECCCCCCC GSNVAAAEAVYARNLGSQSGGNDTQISVGFDPHRVRRLSMLQEELHAHERKLSDLSLNLQ CCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SLENLKRARKELPPDKEALETSLHEEKISLEQLVQQSRAELEEIQASLDASPIEGKISAS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC GQVYSGVKVTIRDVSEEVRADSTAISFYLRNGLIRYGQYTGEQDEDYKRAPSGYAY CEEECCEEEEEEHHHHHHHCCHHHHHHHHHCCEEEECCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MNTRFDQIRRDMQKRYEEDSKRVCVSACAKTLDKALEAAAVQLGIPKYRVEYEVLERGAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCC SFFSFRQKKWKIRAYESSSLEFAAGNVSAPHDSHRDVSSSPNTGHDGAAFVLCKKEGVFL HHHHHHHHCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEE KITAPLGKGRKVSLASVQEKFRARGLALPPADTLKVLIKNATNSYVHVSSFERIPAHDAM EEECCCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCE LSVEIRENDMKAFVTATPPGRNGADICADTILSFLRSNRVVYGIDMERVNSFQDCPVYHE EEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCC PYLVARGTPPKDGENARISYHFETDRTRVHLQELKTGKINFKELNLIHNVVKGQPLAQKL CEEEECCCCCCCCCCCEEEEEEECCCCEEEHHHHCCCCCCHHHHHHHHHHHCCCCHHHHC PAQRGTPGKTVTGTYLPAQSGKDVSIPLGRNTALARDGLTVIAETDGQALLSRRGINVEP CCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEECCCEEEEEECCCHHHHHHCCCCCCE IYVVEGNVSVKTGNIMFLGTVLVHGNVEDNYEIKASGNIEVRGTVGKALLDAEGDILVGQ EEEEECCEEEEECCEEEEEEEEEECCCCCCEEEEECCCEEEEEECCHHHCCCCCCEEEEC GIVGKEEGCVRAGKSLWAKFIQNCASVEAGDLVIVSDGIMNSHVIANRKIICRGRRADII CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCEEEEECCCCCCC GSNVAAAEAVYARNLGSQSGGNDTQISVGFDPHRVRRLSMLQEELHAHERKLSDLSLNLQ CCCHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SLENLKRARKELPPDKEALETSLHEEKISLEQLVQQSRAELEEIQASLDASPIEGKISAS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC GQVYSGVKVTIRDVSEEVRADSTAISFYLRNGLIRYGQYTGEQDEDYKRAPSGYAY CEEECCEEEEEEHHHHHHHCCHHHHHHHHHCCEEEECCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA