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The map label for this gene is yebA [C]

Identifier: 189025931

GI number: 189025931

Start: 775232

End: 776158

Strand: Reverse

Name: yebA [C]

Synonym: TPASS_0706

Alternate gene names: 189025931

Gene position: 776158-775232 (Counterclockwise)

Preceding gene: 189025932

Following gene: 189025930

Centisome position: 68.12

GC content: 56.42

Gene sequence:

>927_bases
ATGGTGCGCGCAGCGGTGTGCTCCTGCCTATGTGTGTGTGTGGCACATCCTGCGGTGTGCGGTCCCTATCCGTTGATAGC
GCAGCTGCAAGGGCAGGATGCGCTCTTTCGTCAGTATAGCGATGACGTGCGCGCTGCGCGCGTGGCATTGGCGCAAGGCA
AGCGGGGAAACGATTTACCCTTGCGTTTTTATGCATATCGCGTAAAAAAGGCAGACACCATCATCCGTATCGCCGCGCGC
TGCGGTATTCCCTATGACGCGGTGGCTAGTTTGAACCGTATTGAGACGCTGCATACCCCCCTTGAGGGGCGTACGTTGCT
TTTGCCAACCGTTCCGGGACTGTACGTTTCTGCGGATCCGCACCTTCCCTTGGAGCGGCTCATTTACGCACTGATAAAAA
AGGGTCAAGGGCCGTCTTTTTTTCTTTCCCTTCCGGGGACTGCGCAGACAACGCATACGCGAGAAAAGCGGGAGGTAGTG
TGCGCGCCTCAGGCCTTGTTTGACGGAACGGTGCGTGCCTTCTTTCTTAAGCCGTTTTATCGTTTTCCGTTGGCATCCGG
AAGACTCACCTCAGGGTTTGGCGCACGCAAAAGCCCGTTCACCGGGCGGCTGAGTTATCATCCAGGTATAGATCTTGCCG
CTCCCATGGGCGCGCTGGTGTATGCGTGTGCGAGCGGACAGGTGGCGACGATTGCGTACAATCGTCTGTATGGCAAGTAC
GTGATTTTGCAGCACACAGACGGAAGGCACAGCTTATACGGACATTTGAGTGCAGTGCGCGTCCGTGTACAGCAAAAACT
GAGTGTGGGAGCGGTGATCGGCAATGTGGGATCGACAGGCGCATCGACCGGGCCACACTTGCATTTTGAGGTACGGGAAG
CGGGGGTACCCCAAAATCCTGAGCGATTCATGGAAAAGTTCCGCTGA

Upstream 100 bases:

>100_bases
TCTTCCTCCGCGGAAGTTCGCCCCGCGCAGGAGTGCTAAGCGGCTGCGTGTGATGCGTCTGTGCCCATTTTCTCCGTTCT
CCTTTCTCCTGCGCGTGCGG

Downstream 100 bases:

>100_bases
TACGTGACGGTCGGGGCGCCGACAGGTGAGGTGTCGACGCGCTCCTCCTCTCTGTGGCACTACCGTTGGGCGTGGGGTTC
GCACCAGGCTCAAGGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MVRAAVCSCLCVCVAHPAVCGPYPLIAQLQGQDALFRQYSDDVRAARVALAQGKRGNDLPLRFYAYRVKKADTIIRIAAR
CGIPYDAVASLNRIETLHTPLEGRTLLLPTVPGLYVSADPHLPLERLIYALIKKGQGPSFFLSLPGTAQTTHTREKREVV
CAPQALFDGTVRAFFLKPFYRFPLASGRLTSGFGARKSPFTGRLSYHPGIDLAAPMGALVYACASGQVATIAYNRLYGKY
VILQHTDGRHSLYGHLSAVRVRVQQKLSVGAVIGNVGSTGASTGPHLHFEVREAGVPQNPERFMEKFR

Sequences:

>Translated_308_residues
MVRAAVCSCLCVCVAHPAVCGPYPLIAQLQGQDALFRQYSDDVRAARVALAQGKRGNDLPLRFYAYRVKKADTIIRIAAR
CGIPYDAVASLNRIETLHTPLEGRTLLLPTVPGLYVSADPHLPLERLIYALIKKGQGPSFFLSLPGTAQTTHTREKREVV
CAPQALFDGTVRAFFLKPFYRFPLASGRLTSGFGARKSPFTGRLSYHPGIDLAAPMGALVYACASGQVATIAYNRLYGKY
VILQHTDGRHSLYGHLSAVRVRVQQKLSVGAVIGNVGSTGASTGPHLHFEVREAGVPQNPERFMEKFR
>Mature_308_residues
MVRAAVCSCLCVCVAHPAVCGPYPLIAQLQGQDALFRQYSDDVRAARVALAQGKRGNDLPLRFYAYRVKKADTIIRIAAR
CGIPYDAVASLNRIETLHTPLEGRTLLLPTVPGLYVSADPHLPLERLIYALIKKGQGPSFFLSLPGTAQTTHTREKREVV
CAPQALFDGTVRAFFLKPFYRFPLASGRLTSGFGARKSPFTGRLSYHPGIDLAAPMGALVYACASGQVATIAYNRLYGKY
VILQHTDGRHSLYGHLSAVRVRVQQKLSVGAVIGNVGSTGASTGPHLHFEVREAGVPQNPERFMEKFR

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=117, Percent_Identity=40.1709401709402, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1789099, Length=127, Percent_Identity=36.2204724409449, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33622; Mature: 33622

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRAAVCSCLCVCVAHPAVCGPYPLIAQLQGQDALFRQYSDDVRAARVALAQGKRGNDLP
CCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LRFYAYRVKKADTIIRIAARCGIPYDAVASLNRIETLHTPLEGRTLLLPTVPGLYVSADP
EEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCC
HLPLERLIYALIKKGQGPSFFLSLPGTAQTTHTREKREVVCAPQALFDGTVRAFFLKPFY
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHEEECCHHHHHHHHHHHHHHHHH
RFPLASGRLTSGFGARKSPFTGRLSYHPGIDLAAPMGALVYACASGQVATIAYNRLYGKY
HCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEE
VILQHTDGRHSLYGHLSAVRVRVQQKLSVGAVIGNVGSTGASTGPHLHFEVREAGVPQNP
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCCCCH
ERFMEKFR
HHHHHHCC
>Mature Secondary Structure
MVRAAVCSCLCVCVAHPAVCGPYPLIAQLQGQDALFRQYSDDVRAARVALAQGKRGNDLP
CCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LRFYAYRVKKADTIIRIAARCGIPYDAVASLNRIETLHTPLEGRTLLLPTVPGLYVSADP
EEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCC
HLPLERLIYALIKKGQGPSFFLSLPGTAQTTHTREKREVVCAPQALFDGTVRAFFLKPFY
CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHEEECCHHHHHHHHHHHHHHHHH
RFPLASGRLTSGFGARKSPFTGRLSYHPGIDLAAPMGALVYACASGQVATIAYNRLYGKY
HCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCEE
VILQHTDGRHSLYGHLSAVRVRVQQKLSVGAVIGNVGSTGASTGPHLHFEVREAGVPQNP
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCCCCH
ERFMEKFR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]