Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025925

Identifier: 189025925

GI number: 189025925

Start: 767884

End: 768276

Strand: Reverse

Name: 189025925

Synonym: TPASS_0700

Alternate gene names: NA

Gene position: 768276-767884 (Counterclockwise)

Preceding gene: 189025926

Following gene: 189025924

Centisome position: 67.42

GC content: 57.0

Gene sequence:

>393_bases
ATGGTGATGGCCGCGGCGCCTTTACAGAATTTGTGTTACGACGGACTTTTACAGGTAACCTCAGGGGGCAATATCTCGCT
CCCTGTACCCTCGAATCAGGTGATATACGCTCATTTCGAACATGTTGATGCGACTCCTGCGGAGCAGGGGCAGGCAGGGG
TGTCGGTGTCTGAGCTGCAGATTTTGGACGCGTTGGTCGAGCGGCTGATAGTGCAGCGTCGGGTAGCGGCAGAAGCGGCA
GACATGGCGGTGCAGAAGCGGCAGGAGACACTGCTCCGCGCCGCAGAGCTTTTTTCTCAGAAGCAAGTGGACGAGACCAA
ACGGCGGGGAGAGTCTCTTCCTTACACCTCAGTAGAAGTACAGGGGCCTGAGCTTTTTGACTTGCGCGCGTAG

Upstream 100 bases:

>100_bases
AGATTAGGAGTTTGTTTTCTAGAAGTTGTTTTTCAATAAAGGGCCGGTTCTAAGTCACGCTCTCCCTTCTGCCGATAGAG
GGGGCGGAGGTGGGGATGCT

Downstream 100 bases:

>100_bases
GGCACGTGCAGGCAGAAGTACTTGACTTTTTTGAGGATAGGGGGGAGACTCCGCCTGGCCGGAGTTCTGAGGCTGGGTAT
GGACTCTTTTGGAGAGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQILDALVERLIVQRRVAAEAA
DMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEVQGPELFDLRA

Sequences:

>Translated_130_residues
MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQILDALVERLIVQRRVAAEAA
DMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEVQGPELFDLRA
>Mature_130_residues
MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQILDALVERLIVQRRVAAEAA
DMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEVQGPELFDLRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y700_TREPA (O83698)

Other databases:

- EMBL:   AE000520
- PIR:   A71294
- RefSeq:   NP_219137.1
- ProteinModelPortal:   O83698
- IntAct:   O83698
- MINT:   MINT-6480415
- GeneID:   2611595
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0700
- NMPDR:   fig|243276.1.peg.696
- TIGR:   TP_0700
- HOGENOM:   HBG251042
- OMA:   MIQTENI
- ProtClustDB:   CLSK218823
- BioCyc:   TPAL243276:TP_0700-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14204; Mature: 14204

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQ
CCCCCCHHHHHHHHCEEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH
ILDALVERLIVQRRVAAEAADMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
QGPELFDLRA
CCCCEECCCC
>Mature Secondary Structure
MVMAAAPLQNLCYDGLLQVTSGGNISLPVPSNQVIYAHFEHVDATPAEQGQAGVSVSELQ
CCCCCCHHHHHHHHCEEEEECCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHH
ILDALVERLIVQRRVAAEAADMAVQKRQETLLRAAELFSQKQVDETKRRGESLPYTSVEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
QGPELFDLRA
CCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876