Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025903

Identifier: 189025903

GI number: 189025903

Start: 744079

End: 745002

Strand: Direct

Name: 189025903

Synonym: TPASS_0678

Alternate gene names: NA

Gene position: 744079-745002 (Clockwise)

Preceding gene: 189025900

Following gene: 189025904

Centisome position: 65.3

GC content: 59.85

Gene sequence:

>924_bases
ATGGAAGCTTATCAGGCGGAGATTATTCGCAGGTTTGGACGCGTGCGGCGTGCGCGCGGCTTTTACCTATACACTGAGCG
TGGGGTTCGCATCACGGATTTATTCCTTGACGGCGGCGCTTCTATTCTTGGACGGAACGCCAGCCGCGCGCGCCTGGACT
TTAAGCGTTATCTTAGCCGCGGGCTGTGGGGTCCCCTACCCACCTGTGCTTCTGCGCAGCTGCAGCAGGCACTACGCACG
TGTTTTCCTGCGCACGAGGTGCGCTACTACGCACATGCCGAACGCGCGCAGGAAGTGTGTGCGCGTTTTCTCAACCTTGC
TTGCGGCGCCGCACCCTGCGAGGTGCCAGTGTGGCGCCCCTGCGCACCGTGCGTCCCGCAAACCGATGTCTTTTTGGTTG
TGCCGCCGTTTCCTTCTCCTGCACCGTTTGTTGCGCTCCGTGCCCACTGTGCCGCGCGCGCCCCTGCGGGGGACGTGCTC
TTTGCTCCGATTGCGCAGGCGATTGCTCGTGCCTTTTGGGACTTAGCGCGCGTGGGTTCCCTTTCTCAGCCCGCACGCGC
CATGCCTCACGCTCTGTTAGACTCCTCACACACCACGCAGGAAGACGCGGTCCCTGCGCTGCCACACACGAAAAAACGGC
GCAGAGGTCTGAACCGCGTGCGCCGCGCACAAAAATGCGCGCGGCAAGAGCGCGACCGCGCACAGCTTATAACGCTTATG
AGTACATGGTGGCGCACGGAAGGGCCTTATCTTTTTCCCACTGTTTCTGAAGAACGGTATGAGGCATTGTTCGCACGTGC
GCTTGACGCGCATATCCTGCTCTCCCCCCTGTACACTGAACCCTCAGTACTCCCTACGCTCGAGCACTATACCCAGCTAT
GCACTTTTTTTCTTCAAGAACAGGAAAAGGAACACCACGAATGA

Upstream 100 bases:

>100_bases
ATCGTCCATTTCGGGGATAGAAAGGTTTGACGAGGCGTTGCCCGCAGGGCGGGGTATGCGCAGGGTGCACAGCGGGGGAG
TGTTCCCCTAAGAGAACAGC

Downstream 100 bases:

>100_bases
ATGAATTTCTCTCTCTGCTCTCTCGAGCACAGACTATTTTGCTGATGTTACGCCTAGCGGTAACGGCGGTTGCTGTGTTC
CTCGCCATTGTCGCGTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MEAYQAEIIRRFGRVRRARGFYLYTERGVRITDLFLDGGASILGRNASRARLDFKRYLSRGLWGPLPTCASAQLQQALRT
CFPAHEVRYYAHAERAQEVCARFLNLACGAAPCEVPVWRPCAPCVPQTDVFLVVPPFPSPAPFVALRAHCAARAPAGDVL
FAPIAQAIARAFWDLARVGSLSQPARAMPHALLDSSHTTQEDAVPALPHTKKRRRGLNRVRRAQKCARQERDRAQLITLM
STWWRTEGPYLFPTVSEERYEALFARALDAHILLSPLYTEPSVLPTLEHYTQLCTFFLQEQEKEHHE

Sequences:

>Translated_307_residues
MEAYQAEIIRRFGRVRRARGFYLYTERGVRITDLFLDGGASILGRNASRARLDFKRYLSRGLWGPLPTCASAQLQQALRT
CFPAHEVRYYAHAERAQEVCARFLNLACGAAPCEVPVWRPCAPCVPQTDVFLVVPPFPSPAPFVALRAHCAARAPAGDVL
FAPIAQAIARAFWDLARVGSLSQPARAMPHALLDSSHTTQEDAVPALPHTKKRRRGLNRVRRAQKCARQERDRAQLITLM
STWWRTEGPYLFPTVSEERYEALFARALDAHILLSPLYTEPSVLPTLEHYTQLCTFFLQEQEKEHHE
>Mature_307_residues
MEAYQAEIIRRFGRVRRARGFYLYTERGVRITDLFLDGGASILGRNASRARLDFKRYLSRGLWGPLPTCASAQLQQALRT
CFPAHEVRYYAHAERAQEVCARFLNLACGAAPCEVPVWRPCAPCVPQTDVFLVVPPFPSPAPFVALRAHCAARAPAGDVL
FAPIAQAIARAFWDLARVGSLSQPARAMPHALLDSSHTTQEDAVPALPHTKKRRRGLNRVRRAQKCARQERDRAQLITLM
STWWRTEGPYLFPTVSEERYEALFARALDAHILLSPLYTEPSVLPTLEHYTQLCTFFLQEQEKEHHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.burgdorferi BB0340

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y678_TREPA (O83684)

Other databases:

- EMBL:   AE000520
- PIR:   F71294
- RefSeq:   NP_219115.1
- ProteinModelPortal:   O83684
- IntAct:   O83684
- GeneID:   2611258
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0678
- NMPDR:   fig|243276.1.peg.674
- TIGR:   TP_0678
- HOGENOM:   HBG251034
- OMA:   YIMENTW
- ProtClustDB:   CLSK491142
- BioCyc:   TPAL243276:TP_0678-MONOMER
- InterPro:   IPR015422
- Gene3D:   G3DSA:3.90.1150.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34764; Mature: 34764

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAYQAEIIRRFGRVRRARGFYLYTERGVRITDLFLDGGASILGRNASRARLDFKRYLSR
CCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCHHHHCCCCHHHHHHHHHHHHH
GLWGPLPTCASAQLQQALRTCFPAHEVRYYAHAERAQEVCARFLNLACGAAPCEVPVWRP
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
CAPCVPQTDVFLVVPPFPSPAPFVALRAHCAARAPAGDVLFAPIAQAIARAFWDLARVGS
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LSQPARAMPHALLDSSHTTQEDAVPALPHTKKRRRGLNRVRRAQKCARQERDRAQLITLM
CCCHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STWWRTEGPYLFPTVSEERYEALFARALDAHILLSPLYTEPSVLPTLEHYTQLCTFFLQE
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
QEKEHHE
HHHHCCC
>Mature Secondary Structure
MEAYQAEIIRRFGRVRRARGFYLYTERGVRITDLFLDGGASILGRNASRARLDFKRYLSR
CCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCHHHHCCCCHHHHHHHHHHHHH
GLWGPLPTCASAQLQQALRTCFPAHEVRYYAHAERAQEVCARFLNLACGAAPCEVPVWRP
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
CAPCVPQTDVFLVVPPFPSPAPFVALRAHCAARAPAGDVLFAPIAQAIARAFWDLARVGS
CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LSQPARAMPHALLDSSHTTQEDAVPALPHTKKRRRGLNRVRRAQKCARQERDRAQLITLM
CCCHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STWWRTEGPYLFPTVSEERYEALFARALDAHILLSPLYTEPSVLPTLEHYTQLCTFFLQE
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
QEKEHHE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876