| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is gltX
Identifier: 189025898
GI number: 189025898
Start: 739502
End: 741115
Strand: Reverse
Name: gltX
Synonym: TPASS_0673
Alternate gene names: 189025898
Gene position: 741115-739502 (Counterclockwise)
Preceding gene: 189025901
Following gene: 189025897
Centisome position: 65.04
GC content: 56.32
Gene sequence:
>1614_bases GTGGAGGTGAGAGTTCGGTACGCACCGTCTCCGACGGGGCTCCAGCACATCGGGGGTATTAGAACTGCTCTCTTCAACTT CTTGTTCGCGCGAGCGCATGCAGGCGTATTTGTCCTCCGTGTCGAGGATACTGACCGCAGTCGCTGCACTGCAGCGTTTG AGCAGAACCTTTACGATACGCTCCGTTGGCTTGGGGTCTCCTGGGATGAGGGGGGAGGGTGCCCAGAAACAGCGGTGAAG CAGGGCGCGCGGGGGGATGGCCGCTCTGTTGCTCACGCTGGTGGGGCCTATGGCCCTTACACGCAGTCTGCACGGACAGA TCTCTACCGCGCGCAGGTGGCGCGGCTCGTTGAGACAGGGCAGGCGTATTATTGTTTTTGCGATGCGTCGCGGCTCGAGC GCGTTCGTAAGATCCGTACGCTCAACAGGATGCCCCCCGGTTATGACCGGCATTGCCGCGAGCTCCTGCCTGAAGAAGTT CGGGAATGTCTCGCATCCGGGGTTCCACATGTGATCCGCTTTAAGGTCCCCTTGGAAGGGAGTACTCATTTCCGCGATGC GCTGCTCGGTGATATCGAGTGGCAAAATGAGGAGATCAATCCAGACCCGATTTTACTGAAAAGCGACGGGTTCCCCACTT ACCATTTGGCTAATGTGGTAGATGACCATGCTATGCGTATTACGCATGTTTTGCGCGCTCAGGAGTGGGTTCCCTCCACC CCGTTACACCTTCTGTTGTACCGTGCTTTTGGCTGGCAGCCCCCGCTCTTCTGTCATCTTCCGATGGTTATGGGGGCAGA TGGGCACAAGTTGTCAAAGCGGCATGGAGCTACTAGCTGTGATGAGTTCCGCAACGCGGGGTATTTGCCTGAAGCGTTGC TCAACTATGTTGCAATGCTCGGTTGCTCGTACGGAGAAGGTCAGGATCTGTTCACGCGAGAGCAGCTGTGTGCGCACTTT TCTCTGTCGCGTTTAAATAAGTCACCGGCTGTTTTTGACTATAAAAAGCTTGCGTGGTTTAACGGTCAATATATCCGTGC AAAAAGTGACGAGCAGCTGTGTGCGCTCGTGTGGCCTTTCATTGCAAACGCCGGTGTGTGTGGCCACATTCCGGCAGATG TGGAAGCAGGAGCTGTGCGCACACGACGTTTTGCAGACGAGGCGCCGTGTGCGCCTACAGAAGCGCAGCGTTCCATGCTC ATGCGAGTTATCCCGCTGATTAAGGAGCGGTTGCGGTTTCTAACCGATGCGCCGGAGTTGGTGCGTTGTTTTTTTCAAGA ACCGTCTCTCCCTGAACAAGGGGTGTTTGTGCCGAAGCGCTTGGATGTTGCGCAGGTGCGCGCGGTACTGGTGCGCGCCA GGGGCCTGGTGCACGAAATAGTGAGTGCCAGTGAACCGGATGTTGAGGTGCTCTTGCGTGCTGAGGCAGAAAAGTTTGGA ATAAAACTTGGTGATTTTCTCATGCCCATTCGCGTTGCGCTCACCGGTGCTACCGTGAGTGCCCCTCTGGTAGGAACTAT CCGCATCCTGGGGGCGTCACGATCCTGTGCGCGTATTGAACACGTCATTCGTGAACGCTTTTCGGATGACAGTCAAGGAG TGGGAGGAGGCTGA
Upstream 100 bases:
>100_bases GCGGTCACGGTGCATGAGGAGTGTAATTTTCAGGGCCTCACAGGGATGCTTGCGCCCCGGAGGGGGATGTGCGATAATCG GCCCCCGGGGAGGGCGAGCG
Downstream 100 bases:
>100_bases TATTCTCAGTTAACGCGGGCTATAGGGAAAAGAGGTATGCAGGGGATGTGTTCAAAGGCGGGCGCGATCTCTGTGAGGTC GCCGCGGGTGCTGACAGTAT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MEVRVRYAPSPTGLQHIGGIRTALFNFLFARAHAGVFVLRVEDTDRSRCTAAFEQNLYDTLRWLGVSWDEGGGCPETAVK QGARGDGRSVAHAGGAYGPYTQSARTDLYRAQVARLVETGQAYYCFCDASRLERVRKIRTLNRMPPGYDRHCRELLPEEV RECLASGVPHVIRFKVPLEGSTHFRDALLGDIEWQNEEINPDPILLKSDGFPTYHLANVVDDHAMRITHVLRAQEWVPST PLHLLLYRAFGWQPPLFCHLPMVMGADGHKLSKRHGATSCDEFRNAGYLPEALLNYVAMLGCSYGEGQDLFTREQLCAHF SLSRLNKSPAVFDYKKLAWFNGQYIRAKSDEQLCALVWPFIANAGVCGHIPADVEAGAVRTRRFADEAPCAPTEAQRSML MRVIPLIKERLRFLTDAPELVRCFFQEPSLPEQGVFVPKRLDVAQVRAVLVRARGLVHEIVSASEPDVEVLLRAEAEKFG IKLGDFLMPIRVALTGATVSAPLVGTIRILGASRSCARIEHVIRERFSDDSQGVGGG
Sequences:
>Translated_537_residues MEVRVRYAPSPTGLQHIGGIRTALFNFLFARAHAGVFVLRVEDTDRSRCTAAFEQNLYDTLRWLGVSWDEGGGCPETAVK QGARGDGRSVAHAGGAYGPYTQSARTDLYRAQVARLVETGQAYYCFCDASRLERVRKIRTLNRMPPGYDRHCRELLPEEV RECLASGVPHVIRFKVPLEGSTHFRDALLGDIEWQNEEINPDPILLKSDGFPTYHLANVVDDHAMRITHVLRAQEWVPST PLHLLLYRAFGWQPPLFCHLPMVMGADGHKLSKRHGATSCDEFRNAGYLPEALLNYVAMLGCSYGEGQDLFTREQLCAHF SLSRLNKSPAVFDYKKLAWFNGQYIRAKSDEQLCALVWPFIANAGVCGHIPADVEAGAVRTRRFADEAPCAPTEAQRSML MRVIPLIKERLRFLTDAPELVRCFFQEPSLPEQGVFVPKRLDVAQVRAVLVRARGLVHEIVSASEPDVEVLLRAEAEKFG IKLGDFLMPIRVALTGATVSAPLVGTIRILGASRSCARIEHVIRERFSDDSQGVGGG >Mature_537_residues MEVRVRYAPSPTGLQHIGGIRTALFNFLFARAHAGVFVLRVEDTDRSRCTAAFEQNLYDTLRWLGVSWDEGGGCPETAVK QGARGDGRSVAHAGGAYGPYTQSARTDLYRAQVARLVETGQAYYCFCDASRLERVRKIRTLNRMPPGYDRHCRELLPEEV RECLASGVPHVIRFKVPLEGSTHFRDALLGDIEWQNEEINPDPILLKSDGFPTYHLANVVDDHAMRITHVLRAQEWVPST PLHLLLYRAFGWQPPLFCHLPMVMGADGHKLSKRHGATSCDEFRNAGYLPEALLNYVAMLGCSYGEGQDLFTREQLCAHF SLSRLNKSPAVFDYKKLAWFNGQYIRAKSDEQLCALVWPFIANAGVCGHIPADVEAGAVRTRRFADEAPCAPTEAQRSML MRVIPLIKERLRFLTDAPELVRCFFQEPSLPEQGVFVPKRLDVAQVRAVLVRARGLVHEIVSASEPDVEVLLRAEAEKFG IKLGDFLMPIRVALTGATVSAPLVGTIRILGASRSCARIEHVIRERFSDDSQGVGGG
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=537, Percent_Identity=34.0782122905028, Blast_Score=285, Evalue=1e-76, Organism=Escherichia coli, GI1788743, Length=523, Percent_Identity=35.1816443594646, Blast_Score=307, Evalue=9e-85, Organism=Escherichia coli, GI226510925, Length=272, Percent_Identity=31.9852941176471, Blast_Score=120, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71993394, Length=334, Percent_Identity=39.8203592814371, Blast_Score=254, Evalue=9e-68, Organism=Saccharomyces cerevisiae, GI6324540, Length=534, Percent_Identity=33.8951310861423, Blast_Score=278, Evalue=2e-75, Organism=Drosophila melanogaster, GI24665321, Length=529, Percent_Identity=35.7277882797732, Blast_Score=301, Evalue=6e-82,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_TREPA (O83679)
Other databases:
- EMBL: AE000520 - PIR: D71296 - RefSeq: NP_219110.1 - ProteinModelPortal: O83679 - SMR: O83679 - IntAct: O83679 - GeneID: 2611576 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0673 - NMPDR: fig|243276.1.peg.669 - TIGR: TP_0673 - HOGENOM: HBG628189 - OMA: MAHIPLI - ProtClustDB: PRK01406 - BioCyc: TPAL243276:TP_0673-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 59840; Mature: 59840
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 273-273
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVRVRYAPSPTGLQHIGGIRTALFNFLFARAHAGVFVLRVEDTDRSRCTAAFEQNLYDT CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH LRWLGVSWDEGGGCPETAVKQGARGDGRSVAHAGGAYGPYTQSARTDLYRAQVARLVETG HHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC QAYYCFCDASRLERVRKIRTLNRMPPGYDRHCRELLPEEVRECLASGVPHVIRFKVPLEG CEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC STHFRDALLGDIEWQNEEINPDPILLKSDGFPTYHLANVVDDHAMRITHVLRAQEWVPST CCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PLHLLLYRAFGWQPPLFCHLPMVMGADGHKLSKRHGATSCDEFRNAGYLPEALLNYVAML HHHHHHHHHHCCCCCHHEECHHHCCCCCCHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHH GCSYGEGQDLFTREQLCAHFSLSRLNKSPAVFDYKKLAWFNGQYIRAKSDEQLCALVWPF CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCEEEECCCCHHHHHHHHH IANAGVCGHIPADVEAGAVRTRRFADEAPCAPTEAQRSMLMRVIPLIKERLRFLTDAPEL HHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH VRCFFQEPSLPEQGVFVPKRLDVAQVRAVLVRARGLVHEIVSASEPDVEVLLRAEAEKFG HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC IKLGDFLMPIRVALTGATVSAPLVGTIRILGASRSCARIEHVIRERFSDDSQGVGGG CCHHHHHHHHHHHEECCCCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MEVRVRYAPSPTGLQHIGGIRTALFNFLFARAHAGVFVLRVEDTDRSRCTAAFEQNLYDT CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH LRWLGVSWDEGGGCPETAVKQGARGDGRSVAHAGGAYGPYTQSARTDLYRAQVARLVETG HHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC QAYYCFCDASRLERVRKIRTLNRMPPGYDRHCRELLPEEVRECLASGVPHVIRFKVPLEG CEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC STHFRDALLGDIEWQNEEINPDPILLKSDGFPTYHLANVVDDHAMRITHVLRAQEWVPST CCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PLHLLLYRAFGWQPPLFCHLPMVMGADGHKLSKRHGATSCDEFRNAGYLPEALLNYVAML HHHHHHHHHHCCCCCHHEECHHHCCCCCCHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHH GCSYGEGQDLFTREQLCAHFSLSRLNKSPAVFDYKKLAWFNGQYIRAKSDEQLCALVWPF CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCEEEECCCCHHHHHHHHH IANAGVCGHIPADVEAGAVRTRRFADEAPCAPTEAQRSMLMRVIPLIKERLRFLTDAPEL HHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH VRCFFQEPSLPEQGVFVPKRLDVAQVRAVLVRARGLVHEIVSASEPDVEVLLRAEAEKFG HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC IKLGDFLMPIRVALTGATVSAPLVGTIRILGASRSCARIEHVIRERFSDDSQGVGGG CCHHHHHHHHHHHEECCCCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876