Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025893

Identifier: 189025893

GI number: 189025893

Start: 731457

End: 732059

Strand: Reverse

Name: 189025893

Synonym: TPASS_0668

Alternate gene names: NA

Gene position: 732059-731457 (Counterclockwise)

Preceding gene: 189025894

Following gene: 189025892

Centisome position: 64.25

GC content: 44.61

Gene sequence:

>603_bases
ATGAGTTCTGTTCTATCTACACTCTCGGCATTATTGTCAGTGTATGCGCTCCTGTGTACGGCACGCGTATTTCTCTCGTG
GGTGCCCCATCTTTCACATTCACCCCTGGGGGAATTCTTATCTGCGATATGTGAGCCGTACCTGTCCTGGTTTAGGAGAT
TTTCGTTTATGCGTGTTGGTACGGTGGACTTTTCTCCCATGATTGCGATTGGGGTGCTCACCATACTCTCAAACACTGTC
GGAACTATTTTCCTTGTCGGTTCGGTTTCTGTGTTAAAGTTACTGCTGCAAATGCTGATGCTGTTGCTGTGGTCGTTGTG
CAAGTTTGTGTTGGAGTTTTTATTGATTCTTTTTGCTGTTCGATTTGTTTCCGATCGTATGAATGTAAATGTTCATACGT
TATTTTTTGTGATGATGGATAGGATATTAAATCCGGTACGTGTTGCGTTGACCGCTCCGTTTAAGTTCCTTGATTTGAGT
TACCGTGCGTCCTTGCTCTTGTGTGTTCTTGTGATATTGTGCGCGCGGGTTCTTGGAGGTTTTTTTGTGAATGTAGTGGT
GCGGTACTTTTTGACTGGAACACTGCACGTGGCAGTGATGTAA

Upstream 100 bases:

>100_bases
TGGTGTACGTTCCTTCGTGTAAGGTATCTGCCACTGAGGTATTTGCGCAGCAATTAAAAGGTAATGAGAGTTTTGTCCAA
ATTCTAAAGGAGTGCGTGCA

Downstream 100 bases:

>100_bases
TCCGTCGCTTTGAGACAAAGGACTGATATCCCTATTCACTGTAGGCAGTGTTATTCGTCGAAATATGTATTGCCTGAAGA
AATTATTCGGGACGGAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSSVLSTLSALLSVYALLCTARVFLSWVPHLSHSPLGEFLSAICEPYLSWFRRFSFMRVGTVDFSPMIAIGVLTILSNTV
GTIFLVGSVSVLKLLLQMLMLLLWSLCKFVLEFLLILFAVRFVSDRMNVNVHTLFFVMMDRILNPVRVALTAPFKFLDLS
YRASLLLCVLVILCARVLGGFFVNVVVRYFLTGTLHVAVM

Sequences:

>Translated_200_residues
MSSVLSTLSALLSVYALLCTARVFLSWVPHLSHSPLGEFLSAICEPYLSWFRRFSFMRVGTVDFSPMIAIGVLTILSNTV
GTIFLVGSVSVLKLLLQMLMLLLWSLCKFVLEFLLILFAVRFVSDRMNVNVHTLFFVMMDRILNPVRVALTAPFKFLDLS
YRASLLLCVLVILCARVLGGFFVNVVVRYFLTGTLHVAVM
>Mature_199_residues
SSVLSTLSALLSVYALLCTARVFLSWVPHLSHSPLGEFLSAICEPYLSWFRRFSFMRVGTVDFSPMIAIGVLTILSNTVG
TIFLVGSVSVLKLLLQMLMLLLWSLCKFVLEFLLILFAVRFVSDRMNVNVHTLFFVMMDRILNPVRVALTAPFKFLDLSY
RASLLLCVLVILCARVLGGFFVNVVVRYFLTGTLHVAVM

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22467; Mature: 22336

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVLSTLSALLSVYALLCTARVFLSWVPHLSHSPLGEFLSAICEPYLSWFRRFSFMRVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
TVDFSPMIAIGVLTILSNTVGTIFLVGSVSVLKLLLQMLMLLLWSLCKFVLEFLLILFAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFVSDRMNVNVHTLFFVMMDRILNPVRVALTAPFKFLDLSYRASLLLCVLVILCARVLGG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFVNVVVRYFLTGTLHVAVM
HHHHHHHHHHHHHHHHHEEC
>Mature Secondary Structure 
SSVLSTLSALLSVYALLCTARVFLSWVPHLSHSPLGEFLSAICEPYLSWFRRFSFMRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
TVDFSPMIAIGVLTILSNTVGTIFLVGSVSVLKLLLQMLMLLLWSLCKFVLEFLLILFAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFVSDRMNVNVHTLFFVMMDRILNPVRVALTAPFKFLDLSYRASLLLCVLVILCARVLGG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFVNVVVRYFLTGTLHVAVM
HHHHHHHHHHHHHHHHHEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA