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The map label for this gene is udk [H]

Identifier: 189025892

GI number: 189025892

Start: 729559

End: 731226

Strand: Reverse

Name: udk [H]

Synonym: TPASS_0667

Alternate gene names: 189025892

Gene position: 731226-729559 (Counterclockwise)

Preceding gene: 189025893

Following gene: 189025891

Centisome position: 64.17

GC content: 50.18

Gene sequence:

>1668_bases
GTGGGAGATTGGATGGGCACGTTTGTGGTGTCACTGCCTGGTGGGCGCCGAGAAAAGTTTTCCGAGTGCGTTCCAGCGCG
CGTCCTCTTTGAGCGATTTTTTGGCACAGAATCGTCTGTGTATGGTTTGATGTGTAACGGTACACCGGTACTGCCATGCC
AGGTGATAGGCGCCGACGCGGTAGTTGAGCCGGTTCGTGAGGATACGGTGTTAGGGGCCGCTCTGTACCGTAGGACTGCG
CGTTTGCTGTTTGCCACAGCGTTTCACTCGGTGTATCCGCATGTGCGATTGTTTGCAGGGTATCGAGTGCAGGGGGGATA
TTGCTACCGTACCGAGGGTGCGTGCGCAGATGACCTGGATGTTTCGTTGGTAGTGCGTAGGATGAAGGCGCTTGTGGCGC
AGGATGCGCCCATTCACATGCAGTATATGACGCGTCAGGAAGCCTTGAATCTGTTTACGCAGTGGAATTTTCCATATTCA
CATCATTATATTCTGGGTTCGTACCGGACTGTGTTTTTAACGCAGGTACTGGACGGTTTTTCTGCGTTGTTTTTTCAGCC
GCTCATGGCTTCTGTAGGGAGGCTCACCGTCTTTGAGGTGCGGATGTGTGCTGAGGGTTGTCTGTTGCGTTTCCCTGAAG
GTGGACAACGCCACATCATTTCTCAGCACAACGCGTCGCCACAGTTTGTGGTAATGTATCGGAGGCATCGGCAGCAAGAA
GAACAGACAAAAATATGCTCAGTAGGACAGTTGAATGCGTGCATTCAGTCTGGTGATGTTGCAACTTGTGTTGACATGGC
TGAGGCGGCGCACAATCGGCAGATTGAGTGTTGTGCCACAGAAATTGCACGAAGGGACAGCGTGCGCGTGGTGTCGATAG
CAGGACCGTCAGGTTCTGGAAAGACAACGATTGCAAAAAAACTTTCAGTGCAGCTGCAAGTACTTGGTTACGATCCGCAT
GTGATTAGTCTTGATGATTACTATGTGGGGATTGAGCGCACGCCGTGTGACGCGGAAGGTAATCCTGATTTTGAGTGCGT
CGAAGCCTTAGATCTTCCCCTGATTAATAAGTTGTTTTTGGATCTCTTGCAGGGGAAGCGTGTTGCACTTCCTTCGTATA
ATTTTAAAACAGGGAAACGAGAGTACCGGGGGCGGGAAGTACAGTTTGGTGAGCGTTCGCTGCTTATTATTGAGGGCATA
CATGGCTTGAACGATCGGCTCATCTCGTTGATGAACCGGCGAGTTGTATTTCGGTTGTACGTCTCTGTGTTCATGCATTT
GTGCTTGGATGAACAGCACAGGGTTTCGGCGTCTGATGGAAGGTTGTTGCGGAGGGTTGTGCGCGACGCGCAGTTTCGCG
GTATTTCTGTCGAAAAAACACTTGAAATGTGGCAACGGGTGCGTGCAGGTGAAGAGCGCTATATTTTCCCTTTTCAGCAC
CGTGCAGACATGATGTTTAACAGTGCATTGGTTTATGAGTTTGCAGTGTTAAAGCGCCGTGCACAGGAAGTTTTAAGCAC
GGTTTCTTCTGCTTGTACCACGTATAGGGAAGTCCGCAATTTGCGTGCCTTGTTGGAGCAGTTTTGTTCGTTGTCTGATG
TGCATGTTCCGGGTCAGTCGATATTAAGAGAATTTATTGGGCAAAGCGATTTTTGCTATTGTCTGTAG

Upstream 100 bases:

>100_bases
GGGTGCCCTAGCCCCTAGGCCACGTCCCGTACGCTTGACACTGTGTGTTAAGAATGGATAGGCTGTCAACGGTTACCTGC
GAAAAAGTCTCGATTCTTGT

Downstream 100 bases:

>100_bases
CGAGTGCTTTTATAATGCAGGGTATGGCGACACAAAGTGACGCGTGCAGAAGGGAAGTGGTGCTTCGAGTGTTATGACGC
TGTATGAATATTATTTGATA

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MGDWMGTFVVSLPGGRREKFSECVPARVLFERFFGTESSVYGLMCNGTPVLPCQVIGADAVVEPVREDTVLGAALYRRTA
RLLFATAFHSVYPHVRLFAGYRVQGGYCYRTEGACADDLDVSLVVRRMKALVAQDAPIHMQYMTRQEALNLFTQWNFPYS
HHYILGSYRTVFLTQVLDGFSALFFQPLMASVGRLTVFEVRMCAEGCLLRFPEGGQRHIISQHNASPQFVVMYRRHRQQE
EQTKICSVGQLNACIQSGDVATCVDMAEAAHNRQIECCATEIARRDSVRVVSIAGPSGSGKTTIAKKLSVQLQVLGYDPH
VISLDDYYVGIERTPCDAEGNPDFECVEALDLPLINKLFLDLLQGKRVALPSYNFKTGKREYRGREVQFGERSLLIIEGI
HGLNDRLISLMNRRVVFRLYVSVFMHLCLDEQHRVSASDGRLLRRVVRDAQFRGISVEKTLEMWQRVRAGEERYIFPFQH
RADMMFNSALVYEFAVLKRRAQEVLSTVSSACTTYREVRNLRALLEQFCSLSDVHVPGQSILREFIGQSDFCYCL

Sequences:

>Translated_555_residues
MGDWMGTFVVSLPGGRREKFSECVPARVLFERFFGTESSVYGLMCNGTPVLPCQVIGADAVVEPVREDTVLGAALYRRTA
RLLFATAFHSVYPHVRLFAGYRVQGGYCYRTEGACADDLDVSLVVRRMKALVAQDAPIHMQYMTRQEALNLFTQWNFPYS
HHYILGSYRTVFLTQVLDGFSALFFQPLMASVGRLTVFEVRMCAEGCLLRFPEGGQRHIISQHNASPQFVVMYRRHRQQE
EQTKICSVGQLNACIQSGDVATCVDMAEAAHNRQIECCATEIARRDSVRVVSIAGPSGSGKTTIAKKLSVQLQVLGYDPH
VISLDDYYVGIERTPCDAEGNPDFECVEALDLPLINKLFLDLLQGKRVALPSYNFKTGKREYRGREVQFGERSLLIIEGI
HGLNDRLISLMNRRVVFRLYVSVFMHLCLDEQHRVSASDGRLLRRVVRDAQFRGISVEKTLEMWQRVRAGEERYIFPFQH
RADMMFNSALVYEFAVLKRRAQEVLSTVSSACTTYREVRNLRALLEQFCSLSDVHVPGQSILREFIGQSDFCYCL
>Mature_554_residues
GDWMGTFVVSLPGGRREKFSECVPARVLFERFFGTESSVYGLMCNGTPVLPCQVIGADAVVEPVREDTVLGAALYRRTAR
LLFATAFHSVYPHVRLFAGYRVQGGYCYRTEGACADDLDVSLVVRRMKALVAQDAPIHMQYMTRQEALNLFTQWNFPYSH
HYILGSYRTVFLTQVLDGFSALFFQPLMASVGRLTVFEVRMCAEGCLLRFPEGGQRHIISQHNASPQFVVMYRRHRQQEE
QTKICSVGQLNACIQSGDVATCVDMAEAAHNRQIECCATEIARRDSVRVVSIAGPSGSGKTTIAKKLSVQLQVLGYDPHV
ISLDDYYVGIERTPCDAEGNPDFECVEALDLPLINKLFLDLLQGKRVALPSYNFKTGKREYRGREVQFGERSLLIIEGIH
GLNDRLISLMNRRVVFRLYVSVFMHLCLDEQHRVSASDGRLLRRVVRDAQFRGISVEKTLEMWQRVRAGEERYIFPFQHR
ADMMFNSALVYEFAVLKRRAQEVLSTVSSACTTYREVRNLRALLEQFCSLSDVHVPGQSILREFIGQSDFCYCL

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0441

COG function: function code J; Threonyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17539894, Length=200, Percent_Identity=28.5, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17539892, Length=200, Percent_Identity=28.5, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324339, Length=192, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 62973; Mature: 62842

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDWMGTFVVSLPGGRREKFSECVPARVLFERFFGTESSVYGLMCNGTPVLPCQVIGADA
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCHH
VVEPVREDTVLGAALYRRTARLLFATAFHSVYPHVRLFAGYRVQGGYCYRTEGACADDLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEECCCEEEECCCCCCCCCH
VSLVVRRMKALVAQDAPIHMQYMTRQEALNLFTQWNFPYSHHYILGSYRTVFLTQVLDGF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
SALFFQPLMASVGRLTVFEVRMCAEGCLLRFPEGGQRHIISQHNASPQFVVMYRRHRQQE
HHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCCEEEHHHHHCCHH
EQTKICSVGQLNACIQSGDVATCVDMAEAAHNRQIECCATEIARRDSVRVVSIAGPSGSG
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCC
KTTIAKKLSVQLQVLGYDPHVISLDDYYVGIERTPCDAEGNPDFECVEALDLPLINKLFL
CHHHHHEEEEEEEEEECCCCEEEECCEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHH
DLLQGKRVALPSYNFKTGKREYRGREVQFGERSLLIIEGIHGLNDRLISLMNRRVVFRLY
HHHCCCEEECCCCCCCCCCHHHCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
VSVFMHLCLDEQHRVSASDGRLLRRVVRDAQFRGISVEKTLEMWQRVRAGEERYIFPFQH
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHH
RADMMFNSALVYEFAVLKRRAQEVLSTVSSACTTYREVRNLRALLEQFCSLSDVHVPGQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ILREFIGQSDFCYCL
HHHHHCCCCCCEEEC
>Mature Secondary Structure 
GDWMGTFVVSLPGGRREKFSECVPARVLFERFFGTESSVYGLMCNGTPVLPCQVIGADA
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCHH
VVEPVREDTVLGAALYRRTARLLFATAFHSVYPHVRLFAGYRVQGGYCYRTEGACADDLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECEEECCCEEEECCCCCCCCCH
VSLVVRRMKALVAQDAPIHMQYMTRQEALNLFTQWNFPYSHHYILGSYRTVFLTQVLDGF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHH
SALFFQPLMASVGRLTVFEVRMCAEGCLLRFPEGGQRHIISQHNASPQFVVMYRRHRQQE
HHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCCEEEHHHHHCCHH
EQTKICSVGQLNACIQSGDVATCVDMAEAAHNRQIECCATEIARRDSVRVVSIAGPSGSG
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCC
KTTIAKKLSVQLQVLGYDPHVISLDDYYVGIERTPCDAEGNPDFECVEALDLPLINKLFL
CHHHHHEEEEEEEEEECCCCEEEECCEEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHH
DLLQGKRVALPSYNFKTGKREYRGREVQFGERSLLIIEGIHGLNDRLISLMNRRVVFRLY
HHHCCCEEECCCCCCCCCCHHHCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
VSVFMHLCLDEQHRVSASDGRLLRRVVRDAQFRGISVEKTLEMWQRVRAGEERYIFPFQH
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHH
RADMMFNSALVYEFAVLKRRAQEVLSTVSSACTTYREVRNLRALLEQFCSLSDVHVPGQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ILREFIGQSDFCYCL
HHHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA