| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is 189025881
Identifier: 189025881
GI number: 189025881
Start: 721063
End: 721164
Strand: Direct
Name: 189025881
Synonym: TPASS_0656
Alternate gene names: NA
Gene position: 721063-721164 (Clockwise)
Preceding gene: 189025880
Following gene: 189025888
Centisome position: 63.28
GC content: 55.88
Gene sequence:
>102_bases ATGCGCACTGGAACGCGGTGCGATTTAGGTGAACTCAGTCATCCGCGCAAAACACTCCCACCCCGAGGGATGGGTATCCT CTGCAACTACACAGGCAACTGA
Upstream 100 bases:
>100_bases GAAGCGGCAGCATATCAGAAGAAGACTCCATACTACAGCGAGCATGACCTCGAGCGAGGAACGCTAAAAACAGATGTGGG GGCAGCAATCGAACACTACA
Downstream 100 bases:
>100_bases GGCAATGAGTTAGGAGACCAGGGGGAGTCGGACGCAGCGCGGTTCTCTCTCTGGATCTCTTCGTATACCTCTTGTCGGAA TATTTTCACCGAACGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 33; Mature: 33
Protein sequence:
>33_residues MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN
Sequences:
>Translated_33_residues MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN >Mature_33_residues MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y656_TREPA (O83662)
Other databases:
- EMBL: AE000520 - PIR: A71297 - RefSeq: NP_219093.1 - ProteinModelPortal: O83662 - IntAct: O83662 - GeneID: 2611154 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0656 - NMPDR: fig|243276.1.peg.652 - TIGR: TP_0656 - HOGENOM: HBG251023 - ProtClustDB: CLSK2300265 - BioCyc: TPAL243276:TP_0656-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3646; Mature: 3646
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 12.1 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 12.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876