Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

Click here to switch to the map view.

The map label for this gene is 189025881

Identifier: 189025881

GI number: 189025881

Start: 721063

End: 721164

Strand: Direct

Name: 189025881

Synonym: TPASS_0656

Alternate gene names: NA

Gene position: 721063-721164 (Clockwise)

Preceding gene: 189025880

Following gene: 189025888

Centisome position: 63.28

GC content: 55.88

Gene sequence:

>102_bases
ATGCGCACTGGAACGCGGTGCGATTTAGGTGAACTCAGTCATCCGCGCAAAACACTCCCACCCCGAGGGATGGGTATCCT
CTGCAACTACACAGGCAACTGA

Upstream 100 bases:

>100_bases
GAAGCGGCAGCATATCAGAAGAAGACTCCATACTACAGCGAGCATGACCTCGAGCGAGGAACGCTAAAAACAGATGTGGG
GGCAGCAATCGAACACTACA

Downstream 100 bases:

>100_bases
GGCAATGAGTTAGGAGACCAGGGGGAGTCGGACGCAGCGCGGTTCTCTCTCTGGATCTCTTCGTATACCTCTTGTCGGAA
TATTTTCACCGAACGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 33; Mature: 33

Protein sequence:

>33_residues
MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN

Sequences:

>Translated_33_residues
MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN
>Mature_33_residues
MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y656_TREPA (O83662)

Other databases:

- EMBL:   AE000520
- PIR:   A71297
- RefSeq:   NP_219093.1
- ProteinModelPortal:   O83662
- IntAct:   O83662
- GeneID:   2611154
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0656
- NMPDR:   fig|243276.1.peg.652
- TIGR:   TP_0656
- HOGENOM:   HBG251023
- ProtClustDB:   CLSK2300265
- BioCyc:   TPAL243276:TP_0656-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3646; Mature: 3646

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
12.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MRTGTRCDLGELSHPRKTLPPRGMGILCNYTGN
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876