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The map label for this gene is tpn50 [H]

Identifier: 189025850

GI number: 189025850

Start: 680276

End: 681706

Strand: Direct

Name: tpn50 [H]

Synonym: TPASS_0624

Alternate gene names: 189025850

Gene position: 680276-681706 (Clockwise)

Preceding gene: 189025849

Following gene: 189025851

Centisome position: 59.7

GC content: 55.0

Gene sequence:

>1431_bases
ATGGGAGTGTCCTGCCTGACGCGTGCTGCCTCTTTTTCAAATCAGTGCCGTTTTCCGTTCGGCGCTCTCTCCCTGGTGTG
GACGCACGCAAGTGCGCCCCATGTGGTACGCAGCAGTGCGAGGCGTTTCATTCTCCTCCTCCTTTTTGTTCTGTTTTCTC
ACGCGCCGTCTGGTGCGCAGACCCAGGATGCCGTACACACCGATGCGGTGCAGGATTGGAAAAACGGTACCATTAACGCA
CAGCTTACGCTAGATCTTGCACGTGCACGTATGCGCCTGCCTGCTGATCGGACAGCAGCTTCTCAGTTCTTGCGTTATAA
AGCGCCTGCACAACTGAAAGATGTATATCTGTCAGTACTCGTCGATTCGCAAAACCGCGTAGGGGACTGCCTTGCACATG
AAAAAATTCGGCTGGCAGATATTACCGCATTGGTTGACGCGGGGCACCACGCCGTGACTACCCTTTCTCCTTCAGTGCGT
AGTCTACAGCTATCGCACCAGACGCCACTTACAGCGTTGGCGCGCCTTTTTGTCACGCACGAAACTGCGTATGTGCCTGC
TATCCCCCCCACGTCTGCCGTGAGCCGCCCTTACACCGGTATCCTCATAGATGCGCGCGGTTCTCTTCCTGTGCACGGCG
AATACGTGTCAGAGCCGCTGAGCGCATGTTTGTTCCCCAAGATTTGGAGCACGGACATGGATTTAATCTACGAAAAGAAT
ATGGTTCACCCTGACCGTGCCAAGGCATGGGGTGTGGTGCGGTACGGCTCGGTTTGGGACGAGAAAATGTACCGAGACAG
GATAGGTACCACGCCCTTAAAAATCATTGCGCGCGGAGTGTTTGGCCAGCAGCGCACGGATCCTATCATTGCATCAAAGG
ATGCAGCCCAGATCTTGGCGCGCCCTGAGAACTTGCGTTTGCTTGCAGAAGGCAACGTGATTATCCTGTGCGACGAAGCA
GCGCTGCGTGTGCACGTGCCGTATCCGCTTGTAGACGAGCACTTTTACTTTGCATACCACGACGTAAAACGCTTCCTAAC
CGACGAGCGGTCCCCCGGTGTCGGTGTTCGCTCTGGCATCAATACCCTCAAGATCACCGTGTACGACGTGCGTTTTGTGG
CAAACTCCCCAGAGATTCTCGCCTCAGAAAAAGATCGGGTAGACGTGATAGCAACCGCACTGAAAAAGATGGGGCCGTAC
ACAAGGTTTTTAATTGAAGGCCACACCGCAGATTTACACCGCCCTCAGGAGGAAGCGGCGCTTTCTGTAGCACGTGCGCA
GCGCATGGCGCAGGAACTGTCCAGACGTGGCATTGAGATGACGCGGATTACTACGGCAGGACACGGTGCGACAAAGCCTA
TCGCGCCAAGCGATACGCACGCGAACAAAGCCAAAAATCGTCGAGTGGAGATCACCATCTTGCGCGATTAG

Upstream 100 bases:

>100_bases
CTACGGCGTTTCAGTAGAAAACCTGGCAGAGGAAAACAATCTAGCAGTAGACGCCACGCTCTCCTTGGGAATGATTCTCA
AAACGCCGAGACGGTAGGGT

Downstream 100 bases:

>100_bases
TGCACGTACCACGGAGCATTCTCCGTGCCGGCTATTTCTCCCAAGTAAAGAGAACCTGCGATGACGTACCGATGGCTTTC
TGCAGTCAGGCGCAGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Antigen tpp57 [H]

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MGVSCLTRAASFSNQCRFPFGALSLVWTHASAPHVVRSSARRFILLLLFVLFSHAPSGAQTQDAVHTDAVQDWKNGTINA
QLTLDLARARMRLPADRTAASQFLRYKAPAQLKDVYLSVLVDSQNRVGDCLAHEKIRLADITALVDAGHHAVTTLSPSVR
SLQLSHQTPLTALARLFVTHETAYVPAIPPTSAVSRPYTGILIDARGSLPVHGEYVSEPLSACLFPKIWSTDMDLIYEKN
MVHPDRAKAWGVVRYGSVWDEKMYRDRIGTTPLKIIARGVFGQQRTDPIIASKDAAQILARPENLRLLAEGNVIILCDEA
ALRVHVPYPLVDEHFYFAYHDVKRFLTDERSPGVGVRSGINTLKITVYDVRFVANSPEILASEKDRVDVIATALKKMGPY
TRFLIEGHTADLHRPQEEAALSVARAQRMAQELSRRGIEMTRITTAGHGATKPIAPSDTHANKAKNRRVEITILRD

Sequences:

>Translated_476_residues
MGVSCLTRAASFSNQCRFPFGALSLVWTHASAPHVVRSSARRFILLLLFVLFSHAPSGAQTQDAVHTDAVQDWKNGTINA
QLTLDLARARMRLPADRTAASQFLRYKAPAQLKDVYLSVLVDSQNRVGDCLAHEKIRLADITALVDAGHHAVTTLSPSVR
SLQLSHQTPLTALARLFVTHETAYVPAIPPTSAVSRPYTGILIDARGSLPVHGEYVSEPLSACLFPKIWSTDMDLIYEKN
MVHPDRAKAWGVVRYGSVWDEKMYRDRIGTTPLKIIARGVFGQQRTDPIIASKDAAQILARPENLRLLAEGNVIILCDEA
ALRVHVPYPLVDEHFYFAYHDVKRFLTDERSPGVGVRSGINTLKITVYDVRFVANSPEILASEKDRVDVIATALKKMGPY
TRFLIEGHTADLHRPQEEAALSVARAQRMAQELSRRGIEMTRITTAGHGATKPIAPSDTHANKAKNRRVEITILRD
>Mature_475_residues
GVSCLTRAASFSNQCRFPFGALSLVWTHASAPHVVRSSARRFILLLLFVLFSHAPSGAQTQDAVHTDAVQDWKNGTINAQ
LTLDLARARMRLPADRTAASQFLRYKAPAQLKDVYLSVLVDSQNRVGDCLAHEKIRLADITALVDAGHHAVTTLSPSVRS
LQLSHQTPLTALARLFVTHETAYVPAIPPTSAVSRPYTGILIDARGSLPVHGEYVSEPLSACLFPKIWSTDMDLIYEKNM
VHPDRAKAWGVVRYGSVWDEKMYRDRIGTTPLKIIARGVFGQQRTDPIIASKDAAQILARPENLRLLAEGNVIILCDEAA
LRVHVPYPLVDEHFYFAYHDVKRFLTDERSPGVGVRSGINTLKITVYDVRFVANSPEILASEKDRVDVIATALKKMGPYT
RFLIEGHTADLHRPQEEAALSVARAQRMAQELSRRGIEMTRITTAGHGATKPIAPSDTHANKAKNRRVEITILRD

Specific function: Could function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 52741; Mature: 52610

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSCLTRAASFSNQCRFPFGALSLVWTHASAPHVVRSSARRFILLLLFVLFSHAPSGAQ
CCHHHHHHHHCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
TQDAVHTDAVQDWKNGTINAQLTLDLARARMRLPADRTAASQFLRYKAPAQLKDVYLSVL
CHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHCCCCCHHHHHHHHHCCCCHHHHHHEEEEE
VDSQNRVGDCLAHEKIRLADITALVDAGHHAVTTLSPSVRSLQLSHQTPLTALARLFVTH
ECCCCHHHHHHHHCCEEHHHHHHHHHCCCCEEEECCCCHHEEEECCCCHHHHHHHHHHHC
ETAYVPAIPPTSAVSRPYTGILIDARGSLPVHGEYVSEPLSACLFPKIWSTDMDLIYEKN
CCEEECCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHCCCCHHHHEECC
MVHPDRAKAWGVVRYGSVWDEKMYRDRIGTTPLKIIARGVFGQQRTDPIIASKDAAQILA
CCCCCCHHHCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEECCHHHHHHC
RPENLRLLAEGNVIILCDEAALRVHVPYPLVDEHFYFAYHDVKRFLTDERSPGVGVRSGI
CCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHCCC
NTLKITVYDVRFVANSPEILASEKDRVDVIATALKKMGPYTRFLIEGHTADLHRPQEEAA
CEEEEEEEEEEEECCCCHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHH
LSVARAQRMAQELSRRGIEMTRITTAGHGATKPIAPSDTHANKAKNRRVEITILRD
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
GVSCLTRAASFSNQCRFPFGALSLVWTHASAPHVVRSSARRFILLLLFVLFSHAPSGAQ
CHHHHHHHHCCCCCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
TQDAVHTDAVQDWKNGTINAQLTLDLARARMRLPADRTAASQFLRYKAPAQLKDVYLSVL
CHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHCCCCCHHHHHHHHHCCCCHHHHHHEEEEE
VDSQNRVGDCLAHEKIRLADITALVDAGHHAVTTLSPSVRSLQLSHQTPLTALARLFVTH
ECCCCHHHHHHHHCCEEHHHHHHHHHCCCCEEEECCCCHHEEEECCCCHHHHHHHHHHHC
ETAYVPAIPPTSAVSRPYTGILIDARGSLPVHGEYVSEPLSACLFPKIWSTDMDLIYEKN
CCEEECCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHCCCCHHHHEECC
MVHPDRAKAWGVVRYGSVWDEKMYRDRIGTTPLKIIARGVFGQQRTDPIIASKDAAQILA
CCCCCCHHHCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEECCHHHHHHC
RPENLRLLAEGNVIILCDEAALRVHVPYPLVDEHFYFAYHDVKRFLTDERSPGVGVRSGI
CCCCEEEEECCCEEEEECCCEEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHCCC
NTLKITVYDVRFVANSPEILASEKDRVDVIATALKKMGPYTRFLIEGHTADLHRPQEEAA
CEEEEEEEEEEEECCCCHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHH
LSVARAQRMAQELSRRGIEMTRITTAGHGATKPIAPSDTHANKAKNRRVEITILRD
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8112835; 7623668; 9665876 [H]