| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025820
Identifier: 189025820
GI number: 189025820
Start: 645627
End: 647660
Strand: Direct
Name: 189025820
Synonym: TPASS_0593
Alternate gene names: NA
Gene position: 645627-647660 (Clockwise)
Preceding gene: 189025819
Following gene: 189025835
Centisome position: 56.66
GC content: 55.11
Gene sequence:
>2034_bases ATGCATGACGCACGCACTTTCTTCATGCGTGGATCTTGCACGTACGCACATCCTGTTGCCATAGGGCGCTTCTTCCCCCT CTCTTCCCCTACTCACACACCACAGGGTACACTTATGAAAAGTCATGGCACCATGTGCTCAAGGAATGCGCTTCTTTTGC CGAGAAGGGGCGCAGGGCTGCATGTTCTTACCCCACGTATACGCGAGGCGCGACCGGTGAACACAGGCGTTAAGGTTATT CTCAGTCTATTCGCGACGCTCGTCCTTATGGTGGGGGTGTTTTTCTGCGCACCACGCGCTTCTTTTGCCGAGTTTGAAAG ACACTTTTACCAACCGACTGTTCTCAGTGCGCTCTCTACCAACTTGCGTGAGGTCAGTAAGGCAAGTGAGGCTTGGCACA GTCGATATCGACCCCTGTTTTCTCAGTTCTGTGCGCTTGATGCAGTCAGAAGTAGTTTCGATCCTGCGCAAAAGGCTGAA GACATTACACAACGTGCCCGGGAGGCCAGTGCGCTCTTGTCTTCTGTCGCTGGTCTCAAAGGGGTGCGTATTGTTGAGGC GCAGAAACCAAATATCCATTTTTCCACCTTTGAGTCCGACGTTCTCCTTGCTGACAGTGGTTCTGTAACCTACAGAAAGT ACAACGCTGAGGAGCACGACGTCCCTCTTCAGTTTCTAGGGGAGCATTCCCCTGAACCGAAGGTTATTATCGACGAGTAC CATGATGCGCTGCTGTACTCTTTCCCCTCCCTGGGGAACTACGGGGAATATCGTGGACGCATTCTTTTCTACTTGTCCTT GCGTGCCTTGGGCACCCACCTTATTGCGGAAAACAAACTGAAGATCACAGACAGCATTGTTCCGCTTTCCGCTGATGACT ACACCTTCGGTGGCATCGTTATTGGTATCCCCCATGAGGGGGTACGTTCCCTCAAACCCTCTGTGCTCGCAGAGTGGAAG CGCAAGCAGTTCAGGGTACAGACAGTCAGGAGTGAGCAGCACGAAGACTGGGCACTGCTCAGTAATGCATCAGGCGCCTT TGTCATTGCACAGGCAGTGCCCGTCTTGCTGTTTGGCTTTACCCCTCTGACGAAGGGCCTTGTCGCTATGGTTGCTGTTG TGACTACTTTTTTGCTCGTATTCCAGTTGCTCAGCCTTCGCCAGGACCCCCTCACAAAACTGAGGGACAGGCTGATACAC TTCCACGCGCAGCTCCTACACAGTTGTCTCGAACAGAAGGAATCACTCGAGTGGGAGGAGGTGCGAACCCGACTTGAACA CCGCAGGCGGGAAACAGATGCAGAAATGAAGAAGTCTCTTCCCAGGCGTCTCCGTATAAGGCGGGGACGCGAGCTCGATG CGCTCCTCAGTAAGGGTTGGGATGACGTCTTCTCCACCTTGGAGCATGGTTACGGTGGTGCGCGTGCTATGAACCGCGCG CAAATCGAACAGCTTGTCAGGGAAGTGCTCGCGCAGAGCCTTGCAAGTGGGGAGGCTGTGCTACCTGTGGCGATGCGTGC GGACACAGCCGATGAAGAGCTCGACGAGGTGCTAGAGGAACTCCCTGACGAGGCAGCCTCTTTGCCTTCCGATTCCAGTC CGGAAGAGGACCTGGACCCCTTGGAGGAAGTCGAGAGTATCGAGGGGACTGCTGAAGAAAGCACACGCGAGTACGCGGCT GCGGGAGACGCGCTCCTCTCGAAAACACCCCAGCTTTCAACGCACAGCGAGTACGTGCCGGCGACACTCGCAGAACTCCT GGGCCGCAACGCAGAGCCCGGCGACGTCGTGCGGGACTCAGCAGTCCTCGAATATATCGAAGGCGTCTTCGACTATCGTC CCTGCTGTTTTTATGAGAGCCACGCTGTCCACGACTGCCTAGAAGTAGTCACGGGAGAAGACGGCCCCTCTCTCAGCCCT ATGGAAAGCATCGTCAGCACCGAGGACGGTCTTTTCACCATTCGGGTGAGTAAGGAGGAAGGAAACCACCTCAACCGCGA TTTCAAGGCCCTGGTGGATTCCGTACTGTACTGA
Upstream 100 bases:
>100_bases GGCAAAGTAAAGAACGAAGCGATGCGCTGTGGATTGCGCTTTTTTCCGTACGGCAAGAAGCGGCACGACGCTCCGTGTGC ACACCCTCGTCTAAGGAACA
Downstream 100 bases:
>100_bases AGAACATATCTTTCCGCCGGTGGAGCCGGTCCTCTTACTCGGAAGCAGGCACGAACGTGTGCGCCACCACGTTGGTTTTT ATGAGCTCATCGACTTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 677; Mature: 677
Protein sequence:
>677_residues MHDARTFFMRGSCTYAHPVAIGRFFPLSSPTHTPQGTLMKSHGTMCSRNALLLPRRGAGLHVLTPRIREARPVNTGVKVI LSLFATLVLMVGVFFCAPRASFAEFERHFYQPTVLSALSTNLREVSKASEAWHSRYRPLFSQFCALDAVRSSFDPAQKAE DITQRAREASALLSSVAGLKGVRIVEAQKPNIHFSTFESDVLLADSGSVTYRKYNAEEHDVPLQFLGEHSPEPKVIIDEY HDALLYSFPSLGNYGEYRGRILFYLSLRALGTHLIAENKLKITDSIVPLSADDYTFGGIVIGIPHEGVRSLKPSVLAEWK RKQFRVQTVRSEQHEDWALLSNASGAFVIAQAVPVLLFGFTPLTKGLVAMVAVVTTFLLVFQLLSLRQDPLTKLRDRLIH FHAQLLHSCLEQKESLEWEEVRTRLEHRRRETDAEMKKSLPRRLRIRRGRELDALLSKGWDDVFSTLEHGYGGARAMNRA QIEQLVREVLAQSLASGEAVLPVAMRADTADEELDEVLEELPDEAASLPSDSSPEEDLDPLEEVESIEGTAEESTREYAA AGDALLSKTPQLSTHSEYVPATLAELLGRNAEPGDVVRDSAVLEYIEGVFDYRPCCFYESHAVHDCLEVVTGEDGPSLSP MESIVSTEDGLFTIRVSKEEGNHLNRDFKALVDSVLY
Sequences:
>Translated_677_residues MHDARTFFMRGSCTYAHPVAIGRFFPLSSPTHTPQGTLMKSHGTMCSRNALLLPRRGAGLHVLTPRIREARPVNTGVKVI LSLFATLVLMVGVFFCAPRASFAEFERHFYQPTVLSALSTNLREVSKASEAWHSRYRPLFSQFCALDAVRSSFDPAQKAE DITQRAREASALLSSVAGLKGVRIVEAQKPNIHFSTFESDVLLADSGSVTYRKYNAEEHDVPLQFLGEHSPEPKVIIDEY HDALLYSFPSLGNYGEYRGRILFYLSLRALGTHLIAENKLKITDSIVPLSADDYTFGGIVIGIPHEGVRSLKPSVLAEWK RKQFRVQTVRSEQHEDWALLSNASGAFVIAQAVPVLLFGFTPLTKGLVAMVAVVTTFLLVFQLLSLRQDPLTKLRDRLIH FHAQLLHSCLEQKESLEWEEVRTRLEHRRRETDAEMKKSLPRRLRIRRGRELDALLSKGWDDVFSTLEHGYGGARAMNRA QIEQLVREVLAQSLASGEAVLPVAMRADTADEELDEVLEELPDEAASLPSDSSPEEDLDPLEEVESIEGTAEESTREYAA AGDALLSKTPQLSTHSEYVPATLAELLGRNAEPGDVVRDSAVLEYIEGVFDYRPCCFYESHAVHDCLEVVTGEDGPSLSP MESIVSTEDGLFTIRVSKEEGNHLNRDFKALVDSVLY >Mature_677_residues MHDARTFFMRGSCTYAHPVAIGRFFPLSSPTHTPQGTLMKSHGTMCSRNALLLPRRGAGLHVLTPRIREARPVNTGVKVI LSLFATLVLMVGVFFCAPRASFAEFERHFYQPTVLSALSTNLREVSKASEAWHSRYRPLFSQFCALDAVRSSFDPAQKAE DITQRAREASALLSSVAGLKGVRIVEAQKPNIHFSTFESDVLLADSGSVTYRKYNAEEHDVPLQFLGEHSPEPKVIIDEY HDALLYSFPSLGNYGEYRGRILFYLSLRALGTHLIAENKLKITDSIVPLSADDYTFGGIVIGIPHEGVRSLKPSVLAEWK RKQFRVQTVRSEQHEDWALLSNASGAFVIAQAVPVLLFGFTPLTKGLVAMVAVVTTFLLVFQLLSLRQDPLTKLRDRLIH FHAQLLHSCLEQKESLEWEEVRTRLEHRRRETDAEMKKSLPRRLRIRRGRELDALLSKGWDDVFSTLEHGYGGARAMNRA QIEQLVREVLAQSLASGEAVLPVAMRADTADEELDEVLEELPDEAASLPSDSSPEEDLDPLEEVESIEGTAEESTREYAA AGDALLSKTPQLSTHSEYVPATLAELLGRNAEPGDVVRDSAVLEYIEGVFDYRPCCFYESHAVHDCLEVVTGEDGPSLSP MESIVSTEDGLFTIRVSKEEGNHLNRDFKALVDSVLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y593_TREPA (O83602)
Other databases:
- EMBL: AE000520 - PIR: B71306 - RefSeq: NP_219031.1 - ProteinModelPortal: O83602 - IntAct: O83602 - GeneID: 2611170 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0593 - NMPDR: fig|243276.1.peg.590 - TIGR: TP_0593 - HOGENOM: HBG251010 - OMA: NEENTEL - ProtClustDB: CLSK491139 - BioCyc: TPAL243276:TP_0593-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75493; Mature: 75493
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2118b7c8)-; HASH(0x21080c40)-; HASH(0x1f971ee8)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDARTFFMRGSCTYAHPVAIGRFFPLSSPTHTPQGTLMKSHGTMCSRNALLLPRRGAGL CCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCEECCCCCEECCCCEEECCCCCCC HVLTPRIREARPVNTGVKVILSLFATLVLMVGVFFCAPRASFAEFERHFYQPTVLSALST EEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHH NLREVSKASEAWHSRYRPLFSQFCALDAVRSSFDPAQKAEDITQRAREASALLSSVAGLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC GVRIVEAQKPNIHFSTFESDVLLADSGSVTYRKYNAEEHDVPLQFLGEHSPEPKVIIDEY CEEEEECCCCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCHHHHCCCCCCCCEEHHHH HDALLYSFPSLGNYGEYRGRILFYLSLRALGTHLIAENKLKITDSIVPLSADDYTFGGIV HHHHHHHCCCCCCCCHHCCEEEEEEEHHHHHHHHHHCCCEEEECCEECCCCCCEEECCEE IGIPHEGVRSLKPSVLAEWKRKQFRVQTVRSEQHEDWALLSNASGAFVIAQAVPVLLFGF EECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEHHHHHHHHHHCC TPLTKGLVAMVAVVTTFLLVFQLLSLRQDPLTKLRDRLIHFHAQLLHSCLEQKESLEWEE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VRTRLEHRRRETDAEMKKSLPRRLRIRRGRELDALLSKGWDDVFSTLEHGYGGARAMNRA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHH QIEQLVREVLAQSLASGEAVLPVAMRADTADEELDEVLEELPDEAASLPSDSSPEEDLDP HHHHHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCH LEEVESIEGTAEESTREYAAAGDALLSKTPQLSTHSEYVPATLAELLGRNAEPGDVVRDS HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH AVLEYIEGVFDYRPCCFYESHAVHDCLEVVTGEDGPSLSPMESIVSTEDGLFTIRVSKEE HHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEEECCC GNHLNRDFKALVDSVLY CCCCHHHHHHHHHHHCH >Mature Secondary Structure MHDARTFFMRGSCTYAHPVAIGRFFPLSSPTHTPQGTLMKSHGTMCSRNALLLPRRGAGL CCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCEECCCCCEECCCCEEECCCCCCC HVLTPRIREARPVNTGVKVILSLFATLVLMVGVFFCAPRASFAEFERHFYQPTVLSALST EEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHH NLREVSKASEAWHSRYRPLFSQFCALDAVRSSFDPAQKAEDITQRAREASALLSSVAGLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC GVRIVEAQKPNIHFSTFESDVLLADSGSVTYRKYNAEEHDVPLQFLGEHSPEPKVIIDEY CEEEEECCCCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCHHHHCCCCCCCCEEHHHH HDALLYSFPSLGNYGEYRGRILFYLSLRALGTHLIAENKLKITDSIVPLSADDYTFGGIV HHHHHHHCCCCCCCCHHCCEEEEEEEHHHHHHHHHHCCCEEEECCEECCCCCCEEECCEE IGIPHEGVRSLKPSVLAEWKRKQFRVQTVRSEQHEDWALLSNASGAFVIAQAVPVLLFGF EECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEHHHHHHHHHHCC TPLTKGLVAMVAVVTTFLLVFQLLSLRQDPLTKLRDRLIHFHAQLLHSCLEQKESLEWEE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VRTRLEHRRRETDAEMKKSLPRRLRIRRGRELDALLSKGWDDVFSTLEHGYGGARAMNRA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHH QIEQLVREVLAQSLASGEAVLPVAMRADTADEELDEVLEELPDEAASLPSDSSPEEDLDP HHHHHHHHHHHHHHCCCCEEEEEHHCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCH LEEVESIEGTAEESTREYAAAGDALLSKTPQLSTHSEYVPATLAELLGRNAEPGDVVRDS HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH AVLEYIEGVFDYRPCCFYESHAVHDCLEVVTGEDGPSLSPMESIVSTEDGLFTIRVSKEE HHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEEECCC GNHLNRDFKALVDSVLY CCCCHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876