| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is algI [H]
Identifier: 189025794
GI number: 189025794
Start: 615648
End: 617135
Strand: Reverse
Name: algI [H]
Synonym: TPASS_0566
Alternate gene names: 189025794
Gene position: 617135-615648 (Counterclockwise)
Preceding gene: 189025795
Following gene: 189025793
Centisome position: 54.16
GC content: 45.5
Gene sequence:
>1488_bases ATGTTTTTTTCTCTCCTTTCGCCGGCTGCTTTTCTGTTTATTTTTTTTATCCTGTATTGGTACGTTTTCCGCACCGCGAC GCAGCGGGTCGTTGTGCTGCTTGTAGCAAACTTTCTTGCTATTGCAGCTTTTGATATTCGCTTCTGCATTCCGTATCTCG TTTTAAGTGCGTTAGCCTACAGCTGTGGGTTGCTCATACTCATGCAGAAAAGTTTCTTATGGAGAAAAGTCCTGCTCATT GCGGGTACCTTGTTGCAGATACTTTTCTTTTGTCTTTTTAAACATTTCTCTGATATGCTCTCGCTCGTGCGTGCATTTGC TCCTGCATATTTTGCGCAGCACACATGGCACCAACATGTAAAAGACTGGAATATATGGCACCCAGTGGGTATTTCGTACT GTACATTCAAATGTATGAGCTATGTGTTTGACGTGTATCTGTGCAAGATACGCAGAAGAGAGCCGTTTGCACGTGTGCTT TTGTATGTGTCTTTTTTTCCTCAAATGATTTCAGGACCTATTGCAAACGCATCGCATTTTTTTACACGTCTGCCGCACAA TTTGCGCGCTGGTGAAAGCCCCTTAGATCGTCCTATCCACTTTGATCGTGCGGTGGTATTACTGTACACGGGGTTGGTCA AGAAAGTTATTTTTGCAGATTTTCTTTCTATACTTGTGACTGATAAAATTTTTACGCTTCCTTCCGCATACAGTAGCACC GAGTTGCTCTTTGGCCTCATCAGTTACAGTGCGGTTTTATACTGCGATTTTTCTGGGTACAGTGACCTGGCAATTGCAGT TGGGTTGCTTTTTGGGTTTGAAACACCGGCGAACTTCAAACGCCCTTACATATCTCAGTCAGTTACTGAATTTTGGAGAC GCTGGCATATTTCCTTTTCTCAATGGTTGAAAGAGTATTTGTATTTCTCACTTGGGGGTTCACGTTTTGGGATCAAAAGA ACGGTGTGTGCACTTTTTTTTACCATGCTGATCGCAGGTCTCTGGCATGGCGTACGCTTGACGTTTCTGTTGTGGGGTAT GGCGCAGGGTGTGGCTTTGGTAATTGAGCGGGTGTATAGGGAAAAAAGACGGGTGAACGGTGCGAATGCCTTTGGATCAA GTAGTGTGATGGGAAGATGGAAAGCGCGTGCTATGCGGTGTATACGCGTCAGTGCATTGTTTCTTTTTGTCAGTGTTGGA TGGCTTATTTTTCGCGCACCGTCTTTTGCAGAAGTGTGGCGGTACGTTACCTTGCTGTTCCGAGGAAGTTGGCATGGGCC ATTCCAAGTTATCACGCCATTTACCGCGTTGCTCGCGCTGTGTGCACTGTGTGTACAACTCCCTTCAGATCGTACGCGTG CGCGCGCGTTTGCTTGCTACTGCGCAGTGCCCTTACCCGTAAAGGCTTTGTGTGCGGCGTTCTTTTTCTTTGTACTGTCG GTTATGACTCCATCAGGTATTGCGCCCTTTATTTATTATAGTTTTTAG
Upstream 100 bases:
>100_bases CTTATGCCTCCTGACAGGGCAGCTGAGATTCAGCGGAAGATGGCAAATAAACCTGCTGACTTTCCCTAGGCGGTTTATAC CAACTTGATAAAGTGCTCTT
Downstream 100 bases:
>100_bases CGAAGGGGCTATGATGACAACAGTGCGTGTTATATTGCAAAGGTGTGCACGGGGAATATGTAGTAATAAGGGTCGGTACA GTGCGAATCAGGTACTGCTT
Product: alginate O-acetylation protein
Products: NA
Alternate protein names: Alginate biosynthesis protein AlgI [H]
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MFFSLLSPAAFLFIFFILYWYVFRTATQRVVVLLVANFLAIAAFDIRFCIPYLVLSALAYSCGLLILMQKSFLWRKVLLI AGTLLQILFFCLFKHFSDMLSLVRAFAPAYFAQHTWHQHVKDWNIWHPVGISYCTFKCMSYVFDVYLCKIRRREPFARVL LYVSFFPQMISGPIANASHFFTRLPHNLRAGESPLDRPIHFDRAVVLLYTGLVKKVIFADFLSILVTDKIFTLPSAYSST ELLFGLISYSAVLYCDFSGYSDLAIAVGLLFGFETPANFKRPYISQSVTEFWRRWHISFSQWLKEYLYFSLGGSRFGIKR TVCALFFTMLIAGLWHGVRLTFLLWGMAQGVALVIERVYREKRRVNGANAFGSSSVMGRWKARAMRCIRVSALFLFVSVG WLIFRAPSFAEVWRYVTLLFRGSWHGPFQVITPFTALLALCALCVQLPSDRTRARAFACYCAVPLPVKALCAAFFFFVLS VMTPSGIAPFIYYSF
Sequences:
>Translated_495_residues MFFSLLSPAAFLFIFFILYWYVFRTATQRVVVLLVANFLAIAAFDIRFCIPYLVLSALAYSCGLLILMQKSFLWRKVLLI AGTLLQILFFCLFKHFSDMLSLVRAFAPAYFAQHTWHQHVKDWNIWHPVGISYCTFKCMSYVFDVYLCKIRRREPFARVL LYVSFFPQMISGPIANASHFFTRLPHNLRAGESPLDRPIHFDRAVVLLYTGLVKKVIFADFLSILVTDKIFTLPSAYSST ELLFGLISYSAVLYCDFSGYSDLAIAVGLLFGFETPANFKRPYISQSVTEFWRRWHISFSQWLKEYLYFSLGGSRFGIKR TVCALFFTMLIAGLWHGVRLTFLLWGMAQGVALVIERVYREKRRVNGANAFGSSSVMGRWKARAMRCIRVSALFLFVSVG WLIFRAPSFAEVWRYVTLLFRGSWHGPFQVITPFTALLALCALCVQLPSDRTRARAFACYCAVPLPVKALCAAFFFFVLS VMTPSGIAPFIYYSF >Mature_495_residues MFFSLLSPAAFLFIFFILYWYVFRTATQRVVVLLVANFLAIAAFDIRFCIPYLVLSALAYSCGLLILMQKSFLWRKVLLI AGTLLQILFFCLFKHFSDMLSLVRAFAPAYFAQHTWHQHVKDWNIWHPVGISYCTFKCMSYVFDVYLCKIRRREPFARVL LYVSFFPQMISGPIANASHFFTRLPHNLRAGESPLDRPIHFDRAVVLLYTGLVKKVIFADFLSILVTDKIFTLPSAYSST ELLFGLISYSAVLYCDFSGYSDLAIAVGLLFGFETPANFKRPYISQSVTEFWRRWHISFSQWLKEYLYFSLGGSRFGIKR TVCALFFTMLIAGLWHGVRLTFLLWGMAQGVALVIERVYREKRRVNGANAFGSSSVMGRWKARAMRCIRVSALFLFVSVG WLIFRAPSFAEVWRYVTLLFRGSWHGPFQVITPFTALLALCALCVQLPSDRTRARAFACYCAVPLPVKALCAAFFFFVLS VMTPSGIAPFIYYSF
Specific function: Together with AlgJ and AlgF, forms an inner membrane complex which probably interacts with the alginate polymerization- transport complex and adds acetyl groups at the O-2 and O-3 positions of polymannuronic acid. Acetylation of alginate is important for
COG id: COG1696
COG function: function code M; Predicted membrane protein involved in D-alanine export
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane-bound acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004299 [H]
Pfam domain/function: PF03062 MBOAT [H]
EC number: NA
Molecular weight: Translated: 56857; Mature: 56857
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFSLLSPAAFLFIFFILYWYVFRTATQRVVVLLVANFLAIAAFDIRFCIPYLVLSALAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SCGLLILMQKSFLWRKVLLIAGTLLQILFFCLFKHFSDMLSLVRAFAPAYFAQHTWHQHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDWNIWHPVGISYCTFKCMSYVFDVYLCKIRRREPFARVLLYVSFFPQMISGPIANASHF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHH FTRLPHNLRAGESPLDRPIHFDRAVVLLYTGLVKKVIFADFLSILVTDKIFTLPSAYSST HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ELLFGLISYSAVLYCDFSGYSDLAIAVGLLFGFETPANFKRPYISQSVTEFWRRWHISFS HHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHH QWLKEYLYFSLGGSRFGIKRTVCALFFTMLIAGLWHGVRLTFLLWGMAQGVALVIERVYR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKRRVNGANAFGSSSVMGRWKARAMRCIRVSALFLFVSVGWLIFRAPSFAEVWRYVTLLF HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RGSWHGPFQVITPFTALLALCALCVQLPSDRTRARAFACYCAVPLPVKALCAAFFFFVLS HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VMTPSGIAPFIYYSF HHCCCCCCCEEEECC >Mature Secondary Structure MFFSLLSPAAFLFIFFILYWYVFRTATQRVVVLLVANFLAIAAFDIRFCIPYLVLSALAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SCGLLILMQKSFLWRKVLLIAGTLLQILFFCLFKHFSDMLSLVRAFAPAYFAQHTWHQHV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDWNIWHPVGISYCTFKCMSYVFDVYLCKIRRREPFARVLLYVSFFPQMISGPIANASHF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHH FTRLPHNLRAGESPLDRPIHFDRAVVLLYTGLVKKVIFADFLSILVTDKIFTLPSAYSST HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ELLFGLISYSAVLYCDFSGYSDLAIAVGLLFGFETPANFKRPYISQSVTEFWRRWHISFS HHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHH QWLKEYLYFSLGGSRFGIKRTVCALFFTMLIAGLWHGVRLTFLLWGMAQGVALVIERVYR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKRRVNGANAFGSSSVMGRWKARAMRCIRVSALFLFVSVGWLIFRAPSFAEVWRYVTLLF HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RGSWHGPFQVITPFTALLALCALCVQLPSDRTRARAFACYCAVPLPVKALCAAFFFFVLS HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VMTPSGIAPFIYYSF HHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636017; 10984043; 12003941; 11208804; 11179370 [H]