Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is algI [H]

Identifier: 189025794

GI number: 189025794

Start: 615648

End: 617135

Strand: Reverse

Name: algI [H]

Synonym: TPASS_0566

Alternate gene names: 189025794

Gene position: 617135-615648 (Counterclockwise)

Preceding gene: 189025795

Following gene: 189025793

Centisome position: 54.16

GC content: 45.5

Gene sequence:

>1488_bases
ATGTTTTTTTCTCTCCTTTCGCCGGCTGCTTTTCTGTTTATTTTTTTTATCCTGTATTGGTACGTTTTCCGCACCGCGAC
GCAGCGGGTCGTTGTGCTGCTTGTAGCAAACTTTCTTGCTATTGCAGCTTTTGATATTCGCTTCTGCATTCCGTATCTCG
TTTTAAGTGCGTTAGCCTACAGCTGTGGGTTGCTCATACTCATGCAGAAAAGTTTCTTATGGAGAAAAGTCCTGCTCATT
GCGGGTACCTTGTTGCAGATACTTTTCTTTTGTCTTTTTAAACATTTCTCTGATATGCTCTCGCTCGTGCGTGCATTTGC
TCCTGCATATTTTGCGCAGCACACATGGCACCAACATGTAAAAGACTGGAATATATGGCACCCAGTGGGTATTTCGTACT
GTACATTCAAATGTATGAGCTATGTGTTTGACGTGTATCTGTGCAAGATACGCAGAAGAGAGCCGTTTGCACGTGTGCTT
TTGTATGTGTCTTTTTTTCCTCAAATGATTTCAGGACCTATTGCAAACGCATCGCATTTTTTTACACGTCTGCCGCACAA
TTTGCGCGCTGGTGAAAGCCCCTTAGATCGTCCTATCCACTTTGATCGTGCGGTGGTATTACTGTACACGGGGTTGGTCA
AGAAAGTTATTTTTGCAGATTTTCTTTCTATACTTGTGACTGATAAAATTTTTACGCTTCCTTCCGCATACAGTAGCACC
GAGTTGCTCTTTGGCCTCATCAGTTACAGTGCGGTTTTATACTGCGATTTTTCTGGGTACAGTGACCTGGCAATTGCAGT
TGGGTTGCTTTTTGGGTTTGAAACACCGGCGAACTTCAAACGCCCTTACATATCTCAGTCAGTTACTGAATTTTGGAGAC
GCTGGCATATTTCCTTTTCTCAATGGTTGAAAGAGTATTTGTATTTCTCACTTGGGGGTTCACGTTTTGGGATCAAAAGA
ACGGTGTGTGCACTTTTTTTTACCATGCTGATCGCAGGTCTCTGGCATGGCGTACGCTTGACGTTTCTGTTGTGGGGTAT
GGCGCAGGGTGTGGCTTTGGTAATTGAGCGGGTGTATAGGGAAAAAAGACGGGTGAACGGTGCGAATGCCTTTGGATCAA
GTAGTGTGATGGGAAGATGGAAAGCGCGTGCTATGCGGTGTATACGCGTCAGTGCATTGTTTCTTTTTGTCAGTGTTGGA
TGGCTTATTTTTCGCGCACCGTCTTTTGCAGAAGTGTGGCGGTACGTTACCTTGCTGTTCCGAGGAAGTTGGCATGGGCC
ATTCCAAGTTATCACGCCATTTACCGCGTTGCTCGCGCTGTGTGCACTGTGTGTACAACTCCCTTCAGATCGTACGCGTG
CGCGCGCGTTTGCTTGCTACTGCGCAGTGCCCTTACCCGTAAAGGCTTTGTGTGCGGCGTTCTTTTTCTTTGTACTGTCG
GTTATGACTCCATCAGGTATTGCGCCCTTTATTTATTATAGTTTTTAG

Upstream 100 bases:

>100_bases
CTTATGCCTCCTGACAGGGCAGCTGAGATTCAGCGGAAGATGGCAAATAAACCTGCTGACTTTCCCTAGGCGGTTTATAC
CAACTTGATAAAGTGCTCTT

Downstream 100 bases:

>100_bases
CGAAGGGGCTATGATGACAACAGTGCGTGTTATATTGCAAAGGTGTGCACGGGGAATATGTAGTAATAAGGGTCGGTACA
GTGCGAATCAGGTACTGCTT

Product: alginate O-acetylation protein

Products: NA

Alternate protein names: Alginate biosynthesis protein AlgI [H]

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MFFSLLSPAAFLFIFFILYWYVFRTATQRVVVLLVANFLAIAAFDIRFCIPYLVLSALAYSCGLLILMQKSFLWRKVLLI
AGTLLQILFFCLFKHFSDMLSLVRAFAPAYFAQHTWHQHVKDWNIWHPVGISYCTFKCMSYVFDVYLCKIRRREPFARVL
LYVSFFPQMISGPIANASHFFTRLPHNLRAGESPLDRPIHFDRAVVLLYTGLVKKVIFADFLSILVTDKIFTLPSAYSST
ELLFGLISYSAVLYCDFSGYSDLAIAVGLLFGFETPANFKRPYISQSVTEFWRRWHISFSQWLKEYLYFSLGGSRFGIKR
TVCALFFTMLIAGLWHGVRLTFLLWGMAQGVALVIERVYREKRRVNGANAFGSSSVMGRWKARAMRCIRVSALFLFVSVG
WLIFRAPSFAEVWRYVTLLFRGSWHGPFQVITPFTALLALCALCVQLPSDRTRARAFACYCAVPLPVKALCAAFFFFVLS
VMTPSGIAPFIYYSF

Sequences:

>Translated_495_residues
MFFSLLSPAAFLFIFFILYWYVFRTATQRVVVLLVANFLAIAAFDIRFCIPYLVLSALAYSCGLLILMQKSFLWRKVLLI
AGTLLQILFFCLFKHFSDMLSLVRAFAPAYFAQHTWHQHVKDWNIWHPVGISYCTFKCMSYVFDVYLCKIRRREPFARVL
LYVSFFPQMISGPIANASHFFTRLPHNLRAGESPLDRPIHFDRAVVLLYTGLVKKVIFADFLSILVTDKIFTLPSAYSST
ELLFGLISYSAVLYCDFSGYSDLAIAVGLLFGFETPANFKRPYISQSVTEFWRRWHISFSQWLKEYLYFSLGGSRFGIKR
TVCALFFTMLIAGLWHGVRLTFLLWGMAQGVALVIERVYREKRRVNGANAFGSSSVMGRWKARAMRCIRVSALFLFVSVG
WLIFRAPSFAEVWRYVTLLFRGSWHGPFQVITPFTALLALCALCVQLPSDRTRARAFACYCAVPLPVKALCAAFFFFVLS
VMTPSGIAPFIYYSF
>Mature_495_residues
MFFSLLSPAAFLFIFFILYWYVFRTATQRVVVLLVANFLAIAAFDIRFCIPYLVLSALAYSCGLLILMQKSFLWRKVLLI
AGTLLQILFFCLFKHFSDMLSLVRAFAPAYFAQHTWHQHVKDWNIWHPVGISYCTFKCMSYVFDVYLCKIRRREPFARVL
LYVSFFPQMISGPIANASHFFTRLPHNLRAGESPLDRPIHFDRAVVLLYTGLVKKVIFADFLSILVTDKIFTLPSAYSST
ELLFGLISYSAVLYCDFSGYSDLAIAVGLLFGFETPANFKRPYISQSVTEFWRRWHISFSQWLKEYLYFSLGGSRFGIKR
TVCALFFTMLIAGLWHGVRLTFLLWGMAQGVALVIERVYREKRRVNGANAFGSSSVMGRWKARAMRCIRVSALFLFVSVG
WLIFRAPSFAEVWRYVTLLFRGSWHGPFQVITPFTALLALCALCVQLPSDRTRARAFACYCAVPLPVKALCAAFFFFVLS
VMTPSGIAPFIYYSF

Specific function: Together with AlgJ and AlgF, forms an inner membrane complex which probably interacts with the alginate polymerization- transport complex and adds acetyl groups at the O-2 and O-3 positions of polymannuronic acid. Acetylation of alginate is important for

COG id: COG1696

COG function: function code M; Predicted membrane protein involved in D-alanine export

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane-bound acyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004299 [H]

Pfam domain/function: PF03062 MBOAT [H]

EC number: NA

Molecular weight: Translated: 56857; Mature: 56857

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCCCCEEEECC
>Mature Secondary Structure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HHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8636017; 10984043; 12003941; 11208804; 11179370 [H]