| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025793
Identifier: 189025793
GI number: 189025793
Start: 614417
End: 615637
Strand: Reverse
Name: 189025793
Synonym: TPASS_0565
Alternate gene names: NA
Gene position: 615637-614417 (Counterclockwise)
Preceding gene: 189025794
Following gene: 189025789
Centisome position: 54.03
GC content: 50.29
Gene sequence:
>1221_bases ATGATGACAACAGTGCGTGTTATATTGCAAAGGTGTGCACGGGGAATATGTAGTAATAAGGGTCGGTACAGTGCGAATCA GGTACTGCTTTTTTGCATACTTACGCTGAGCCTGTGGACGCCATTTCTCGGTCCGGCGTTGCGCCATCCTGCCGTGTACA TACGGCACAAGAGCGTGAAAAACATCTACCTTGCATTCGTAGATCCGCTCATGCACACTGCAGAACAGTGGGGAATAGAT ACGGTATTTCCTCTTTTGCGCGAGAGTTTTTTGCATGCGACAGGTTTGATACAGCATCCGGAGTGGGAAGATACGTTTTA TCACTGCGAGCAACGCTCTTATGAGCCAGCTGCTGCCCTGGCGGAGTCTGTGCCTTCTCCTGTCTTACAGGAGGCCGTGG CCGTTTCCCCTCCGGGGGTGGCGGTTAACGATTCTGTTGCGGAAAGAAAAACAACTGCTCCCGCACGTGTCTTTTCGCGT ACAGCGCTTCGTATTTTGATGTGTGGAGATTCCCAAATGCGTTACCTTACCGGCGGTGCGTTGCAGGTGCTAGGGACGTC TTCGCACGTGCAGATTCAAGAAGTGACGGTTAGTTCTTCTGGTTTTGTGCGGACCGATTATTACCACTGGCCACGAAAAT TTCTCGCGCTCCTGGATACGCACACCCAACAAGAACCATATGCAGCGGTAATTATGGCATTTGGTATGAATGACTATCAA AATTTTTATGATGCGGATGGCTCTTTGTGTGTGACGAAAACTGCACGCTGGGAACGCGCGTATGAGCAAAAAATGCGCGC CTGTTTGAATATTATTCTGCACACAGTACCGAAGGTGTATCTGTTGGGTATGCCAGAGACACGTAACAAACAGTTGAATG AGAAGCTTGTGTACATCGAGCACGTACAAAAGAAAGTAGTGGCGCAATACGATCCGCAGCGGGTGCGCTATTACTCCCTC AAACCAATTGTACCCGGTGTACACGGAACATATGCAAGCGCGATAAGGGACACGCACGGCCGTTGGGTACACGTGATGCA CAAAGACGGCATCCACTACACCATAGAGGGTGGTGCGTACGTTATGGAAACTCTCTTACCCCTTATTCTTGCAGATTTGG AACGGTCTCGTCACGGATACATGCGTTCTTCTCTGGGGTCGCATGAACTCCCTGCGACGAAGGGGATGGAAAGAGCACGT CACGCGTCAACTCGAACATAG
Upstream 100 bases:
>100_bases GTAAAGGCTTTGTGTGCGGCGTTCTTTTTCTTTGTACTGTCGGTTATGACTCCATCAGGTATTGCGCCCTTTATTTATTA TAGTTTTTAGCGAAGGGGCT
Downstream 100 bases:
>100_bases GGATAAACCGCACCGTTGTATCCTGCATGACAGGGGGTGCGTCCTGCAGGGGGTTATCGTACGTCCACACCGTTGCCTGC ACTTGCATAGTGCTGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase MesA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MMTTVRVILQRCARGICSNKGRYSANQVLLFCILTLSLWTPFLGPALRHPAVYIRHKSVKNIYLAFVDPLMHTAEQWGID TVFPLLRESFLHATGLIQHPEWEDTFYHCEQRSYEPAAALAESVPSPVLQEAVAVSPPGVAVNDSVAERKTTAPARVFSR TALRILMCGDSQMRYLTGGALQVLGTSSHVQIQEVTVSSSGFVRTDYYHWPRKFLALLDTHTQQEPYAAVIMAFGMNDYQ NFYDADGSLCVTKTARWERAYEQKMRACLNIILHTVPKVYLLGMPETRNKQLNEKLVYIEHVQKKVVAQYDPQRVRYYSL KPIVPGVHGTYASAIRDTHGRWVHVMHKDGIHYTIEGGAYVMETLLPLILADLERSRHGYMRSSLGSHELPATKGMERAR HASTRT
Sequences:
>Translated_406_residues MMTTVRVILQRCARGICSNKGRYSANQVLLFCILTLSLWTPFLGPALRHPAVYIRHKSVKNIYLAFVDPLMHTAEQWGID TVFPLLRESFLHATGLIQHPEWEDTFYHCEQRSYEPAAALAESVPSPVLQEAVAVSPPGVAVNDSVAERKTTAPARVFSR TALRILMCGDSQMRYLTGGALQVLGTSSHVQIQEVTVSSSGFVRTDYYHWPRKFLALLDTHTQQEPYAAVIMAFGMNDYQ NFYDADGSLCVTKTARWERAYEQKMRACLNIILHTVPKVYLLGMPETRNKQLNEKLVYIEHVQKKVVAQYDPQRVRYYSL KPIVPGVHGTYASAIRDTHGRWVHVMHKDGIHYTIEGGAYVMETLLPLILADLERSRHGYMRSSLGSHELPATKGMERAR HASTRT >Mature_406_residues MMTTVRVILQRCARGICSNKGRYSANQVLLFCILTLSLWTPFLGPALRHPAVYIRHKSVKNIYLAFVDPLMHTAEQWGID TVFPLLRESFLHATGLIQHPEWEDTFYHCEQRSYEPAAALAESVPSPVLQEAVAVSPPGVAVNDSVAERKTTAPARVFSR TALRILMCGDSQMRYLTGGALQVLGTSSHVQIQEVTVSSSGFVRTDYYHWPRKFLALLDTHTQQEPYAAVIMAFGMNDYQ NFYDADGSLCVTKTARWERAYEQKMRACLNIILHTVPKVYLLGMPETRNKQLNEKLVYIEHVQKKVVAQYDPQRVRYYSL KPIVPGVHGTYASAIRDTHGRWVHVMHKDGIHYTIEGGAYVMETLLPLILADLERSRHGYMRSSLGSHELPATKGMERAR HASTRT
Specific function: Unknown
COG id: COG2845
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45991; Mature: 45991
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTVRVILQRCARGICSNKGRYSANQVLLFCILTLSLWTPFLGPALRHPAVYIRHKSVK CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEECCHH NIYLAFVDPLMHTAEQWGIDTVFPLLRESFLHATGLIQHPEWEDTFYHCEQRSYEPAAAL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHH AESVPSPVLQEAVAVSPPGVAVNDSVAERKTTAPARVFSRTALRILMCGDSQMRYLTGGA HHHCCCHHHHHHHHCCCCCCEECCHHHHHHCCCHHHHHHHHHEEEEEECCCCEEEECCCE LQVLGTSSHVQIQEVTVSSSGFVRTDYYHWPRKFLALLDTHTQQEPYAAVIMAFGMNDYQ EEEEECCCCEEEEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH NFYDADGSLCVTKTARWERAYEQKMRACLNIILHTVPKVYLLGMPETRNKQLNEKLVYIE HHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHH HVQKKVVAQYDPQRVRYYSLKPIVPGVHGTYASAIRDTHGRWVHVMHKDGIHYTIEGGAY HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCHH VMETLLPLILADLERSRHGYMRSSLGSHELPATKGMERARHASTRT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MMTTVRVILQRCARGICSNKGRYSANQVLLFCILTLSLWTPFLGPALRHPAVYIRHKSVK CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEEECCHH NIYLAFVDPLMHTAEQWGIDTVFPLLRESFLHATGLIQHPEWEDTFYHCEQRSYEPAAAL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHH AESVPSPVLQEAVAVSPPGVAVNDSVAERKTTAPARVFSRTALRILMCGDSQMRYLTGGA HHHCCCHHHHHHHHCCCCCCEECCHHHHHHCCCHHHHHHHHHEEEEEECCCCEEEECCCE LQVLGTSSHVQIQEVTVSSSGFVRTDYYHWPRKFLALLDTHTQQEPYAAVIMAFGMNDYQ EEEEECCCCEEEEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH NFYDADGSLCVTKTARWERAYEQKMRACLNIILHTVPKVYLLGMPETRNKQLNEKLVYIE HHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHH HVQKKVVAQYDPQRVRYYSLKPIVPGVHGTYASAIRDTHGRWVHVMHKDGIHYTIEGGAY HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCHH VMETLLPLILADLERSRHGYMRSSLGSHELPATKGMERARHASTRT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA